PANDITplus

Below is a list of pfam present in genes that are expressed in Endometrium tissue, according to the records in Human Proteinpedia database.

ID	Name	Type	Description	# Aligned Sequences	Aignment length in AA
PF00001	7tm_1	family	7 transmembrane receptor (rhodopsin family)	64	433
PF00002	7tm_2	family	7 transmembrane receptor (Secretin family)	33	376
PF00004	AAA	family	ATPase family associated with various cellular activities (AAA)	245	410
PF00005	ABC_tran	domain	ABC transporter	65	333
PF00006	ATP-synt_ab	family	ATP synthase alpha/beta family, nucleotide-binding domain	157	994
PF00008	EGF	domain	EGF-like domain	73	51
PF00009	GTP_EFTU	domain	Elongation factor Tu GTP binding domain	222	430
PF00010	HLH	domain	Helix-loop-helix DNA-binding domain	177	93
PF00011	HSP20	family	Hsp20/alpha crystallin family	37	115
PF00012	HSP70	family	Hsp70 protein	34	688
PF00013	KH_1	domain	KH domain	433	93
PF00014	Kunitz_BPTI	domain	Kunitz/Bovine pancreatic trypsin inhibitor domain	153	80
PF00015	MCPsignal	family	Methyl-accepting chemotaxis protein (MCP) signaling domain	10	285
PF00017	SH2	domain	SH2 domain	58	109
PF00018	SH3_1	domain	SH3 domain	61	65
PF00019	TGF_beta	domain	Transforming growth factor beta like domain	21	118
PF00020	TNFR_c6	domain	TNFR/NGFR cysteine-rich region	37	50
PF00021	UPAR_LY6	domain	u-PAR/Ly-6 domain	42	109
PF00022	Actin	family	Actin	24	389
PF00023	Ank	repeat	Ankyrin repeat	1179	59
PF00024	PAN	domain	PAN domain	108	152
PF00025	Arf	domain	ADP-ribosylation factor family	20	201
PF00026	Asp	family	Eukaryotic aspartyl protease	23	516
PF00027	cNMP_binding	domain	Cyclic nucleotide-binding domain	352	142
PF00028	Cadherin	family	Cadherin domain	57	129
PF00030	Crystall	domain	Beta/Gamma crystallin	37	95
PF00031	Cystatin	domain	Cystatin domain	49	109
PF00034	Cytochrom_C	domain	Cytochrome c	50	131
PF00035	dsrm	domain	Double-stranded RNA binding motif	85	77
PF00036	efhand	domain	EF hand	937	29
PF00037	Fer4	domain	4Fe-4S binding domain	533	24
PF00038	Filament	family	Intermediate filament protein	36	377
PF00039	fn1	domain	Fibronectin type I domain	20	42
PF00040	fn2	domain	Fibronectin type II domain	17	42
PF00041	fn3	domain	Fibronectin type III domain	108	120
PF00045	Hemopexin	repeat	Hemopexin	76	58
PF00046	Homeobox	domain	Homeobox domain	189	71
PF00047	ig	domain	Immunoglobulin domain	89	93
PF00048	IL8	domain	Small cytokines (intecrine/chemokine), interleukin-8 like	107	75
PF00050	Kazal_1	domain	Kazal-type serine protease inhibitor domain	52	66
PF00051	Kringle	domain	Kringle domain	24	85
PF00052	Laminin_B	family	Laminin B (Domain IV)	9	150
PF00053	Laminin_EGF	family	Laminin EGF-like (Domains III and V)	72	72
PF00055	Laminin_N	family	Laminin N-terminal (Domain VI)	9	264
PF00056	Ldh_1_N	family	lactate/malate dehydrogenase, NAD binding domain	30	175
PF00057	Ldl_recept_a	repeat	Low-density lipoprotein receptor domain class A	53	62
PF00058	Ldl_recept_b	repeat	Low-density lipoprotein receptor repeat class B	28	57
PF00059	Lectin_C	domain	Lectin C-type domain	44	136
PF00060	Lig_chan	family	Ligand-gated ion channel	51	425
PF00061	Lipocalin	domain	Lipocalin / cytosolic fatty-acid binding protein family	157	186
PF00063	Myosin_head	domain	Myosin head (motor domain)	24	956
PF00066	Notch	domain	Notch (DSL) domain	10	42
PF00069	Pkinase	domain	Protein kinase domain	54	473
PF00070	Pyr_redox	domain	Pyridine nucleotide-disulphide oxidoreductase	131	130
PF00071	Ras	domain	Ras family	61	229
PF00072	Response_reg	domain	Response regulator receiver domain	54	158
PF00074	RnaseA	domain	Pancreatic ribonuclease	30	142
PF00076	RRM_1	domain	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	79	80
PF00079	Serpin	domain	Serpin (serine protease inhibitor)	42	423
PF00080	Sod_Cu	domain	Copper/zinc superoxide dismutase (SODC)	28	203
PF00081	Sod_Fe_N	domain	Iron/manganese superoxide dismutases, alpha-hairpin domain	26	91
PF00083	Sugar_tr	family	Sugar (and other) transporter	49	617
PF00084	Sushi	domain	Sushi domain (SCR repeat)	80	92
PF00085	Thioredoxin	domain	Thioredoxin	51	122
PF00086	Thyroglobulin_1	domain	Thyroglobulin type-1 repeat	20	84
PF00089	Trypsin	domain	Trypsin	76	355
PF00090	TSP_1	family	Thrombospondin type 1 domain	31	62
PF00091	Tubulin	domain	Tubulin/FtsZ family, GTPase domain	126	285
PF00092	VWA	domain	von Willebrand factor type A domain	195	296
PF00093	VWC	family	von Willebrand factor type C domain	20	99
PF00095	WAP	domain	WAP-type (Whey Acidic Protein) 'four-disulfide core'	80	68
PF00096	zf-C2H2	domain	Zinc finger, C2H2 type	196	35
PF00097	zf-C3HC4	domain	Zinc finger, C3HC4 type (RING finger)	65	74
PF00098	zf-CCHC	domain	Zinc knuckle	208	18
PF00100	Zona_pellucida	family	Zona pellucida-like domain	84	403
PF00102	Y_phosphatase	domain	Protein-tyrosine phosphatase	123	451
PF00104	Hormone_recep	family	Ligand-binding domain of nuclear hormone receptor	187	336
PF00105	zf-C4	domain	Zinc finger, C4 type (two domains)	27	80
PF00106	adh_short	domain	short chain dehydrogenase	269	218
PF00107	ADH_zinc_N	family	Zinc-binding dehydrogenase	110	216
PF00112	Peptidase_C1	domain	Papain family cysteine protease	162	367
PF00118	Cpn60_TCP1	family	TCP-1/cpn60 chaperonin family	41	625
PF00122	E1-E2_ATPase	family	E1-E2 ATPase	104	337
PF00125	Histone	domain	Core histone H2A/H2B/H3/H4	70	85
PF00128	Alpha-amylase	domain	Alpha amylase, catalytic domain	54	673
PF00129	MHC_I	domain	Class I Histocompatibility antigen, domains alpha 1 and 2	25	181
PF00130	C1_1	domain	Phorbol esters/diacylglycerol binding domain (C1 domain)	46	75
PF00131	Metallothio	domain	Metallothionein	21	80
PF00134	Cyclin_N	domain	Cyclin, N-terminal domain	150	194
PF00135	COesterase	domain	Carboxylesterase	129	889
PF00136	DNA_pol_B	family	DNA polymerase family B	76	891
PF00145	DNA_methylase	domain	C-5 cytosine-specific DNA methylase	31	546
PF00147	Fibrinogen_C	domain	Fibrinogen beta and gamma chains, C-terminal globular domain	11	272
PF00149	Metallophos	domain	Calcineurin-like phosphoesterase	339	556
PF00153	Mito_carr	family	Mitochondrial carrier protein	210	152
PF00154	RecA	family	recA bacterial DNA recombination protein	28	329
PF00157	Pou	domain	Pou domain - N-terminal to homeobox domain	10	78
PF00159	Hormone_3	family	Pancreatic hormone peptide	15	40
PF00167	FGF	domain	Fibroblast growth factor	27	166
PF00168	C2	domain	C2 domain	409	188
PF00169	PH	domain	PH domain	149	333
PF00170	bZIP_1	family	bZIP transcription factor	22	65
PF00171	Aldedh	family	Aldehyde dehydrogenase family	122	616
PF00173	Cyt-b5	domain	Cytochrome b5-like Heme/Steroid binding domain	234	176
PF00175	NAD_binding_1	domain	Oxidoreductase NAD-binding domain	73	149
PF00176	SNF2_N	family	SNF2 family N-terminal domain	23	510
PF00178	Ets	domain	Ets-domain	15	92
PF00179	UQ_con	domain	Ubiquitin-conjugating enzyme	75	239
PF00180	Iso_dh	domain	Isocitrate/isopropylmalate dehydrogenase	25	464
PF00183	HSP90	family	Hsp90 protein	11	571
PF00191	Annexin	family	Annexin	181	81
PF00193	Xlink	domain	Extracellular link domain	12	105
PF00194	Carb_anhydrase	domain	Eukaryotic-type carbonic anhydrase	14	286
PF00198	2-oxoacid_dh	domain	2-oxoacid dehydrogenases acyltransferase (catalytic domain)	79	290
PF00199	Catalase	domain	Catalase	21	408
PF00200	Disintegrin	domain	Disintegrin	89	111
PF00203	Ribosomal_S19	domain	Ribosomal protein S19	22	82
PF00204	DNA_gyraseB	domain	DNA gyrase B	65	235
PF00206	Lyase_1	domain	Lyase	19	345
PF00207	A2M	family	Alpha-2-macroglobulin family	60	111
PF00208	ELFV_dehydrog	domain	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase	127	330
PF00211	Guanylate_cyc	domain	Adenylate and Guanylate cyclase catalytic domain	21	248
PF00217	ATP-gua_Ptrans	domain	ATP:guanido phosphotransferase, C-terminal catalytic domain	6	275
PF00226	DnaJ	domain	DnaJ domain	272	103
PF00227	Proteasome	domain	Proteasome A-type and B-type	185	269
PF00228	Bowman-Birk_leg	domain	Bowman-Birk serine protease inhibitor family	55	31
PF00229	TNF	domain	TNF(Tumour Necrosis Factor) family	52	171
PF00230	MIP	family	Major intrinsic protein	17	335
PF00237	Ribosomal_L22	domain	Ribosomal protein L22p/L17e	20	140
PF00240	ubiquitin	domain	Ubiquitin family	93	89
PF00244	14-3-3	domain	14-3-3 protein	16	242
PF00248	Aldo_ket_red	domain	Aldo/keto reductase family	67	402
PF00249	Myb_DNA-binding	domain	Myb-like DNA-binding domain	205	100
PF00250	Fork_head	domain	Fork head domain	21	140
PF00253	Ribosomal_S14	family	Ribosomal protein S14p/S29e	22	57
PF00254	FKBP_C	domain	FKBP-type peptidyl-prolyl cis-trans isomerase	184	253
PF00258	Flavodoxin_1	domain	Flavodoxin	94	240
PF00261	Tropomyosin	family	Tropomyosin	8	237
PF00262	Calreticulin	family	Calreticulin family	11	389
PF00270	DEAD	domain	DEAD/DEAH box helicase	201	548
PF00271	Helicase_C	family	Helicase conserved C-terminal domain	506	169
PF00273	Serum_albumin	domain	Serum albumin family	43	186
PF00274	Glycolytic	domain	Fructose-bisphosphate aldolase class-I	11	353
PF00278	Orn_DAP_Arg_deC	domain	Pyridoxal-dependent decarboxylase, C-terminal sheet domain	55	220
PF00282	Pyridoxal_deC	family	Pyridoxal-dependent decarboxylase conserved domain	12	407
PF00287	Na_K-ATPase	family	Sodium / potassium ATPase beta chain	11	344
PF00301	Rubredoxin	domain	Rubredoxin	43	54
PF00303	Thymidylat_synt	domain	Thymidylate synthase	19	384
PF00305	Lipoxygenase	domain	Lipoxygenase	17	698
PF00306	ATP-synt_ab_C	domain	ATP synthase alpha/beta chain, C terminal domain	156	211
PF00307	CH	domain	Calponin homology (CH) domain	203	151
PF00313	CSD	domain	'Cold-shock' DNA-binding domain	41	75
PF00319	SRF-TF	domain	SRF-type transcription factor (DNA-binding and dimerisation domain)	10	51
PF00320	GATA	domain	GATA zinc finger	76	45
PF00324	AA_permease	family	Amino acid permease	28	621
PF00330	Aconitase	family	Aconitase family (aconitate hydratase)	12	531
PF00334	NDK	domain	Nucleoside diphosphate kinase	12	135
PF00335	Tetraspannin	family	Tetraspanin family	69	362
PF00337	Gal-bind_lectin	domain	Galactoside-binding lectin	87	275
PF00343	Phosphorylase	family	Carbohydrate phosphorylase	9	747
PF00350	Dynamin_N	family	Dynamin family	84	363
PF00354	Pentaxin	domain	Pentaxin family	9	209
PF00355	Rieske	domain	Rieske [2Fe-2S] domain	160	133
PF00357	Integrin_alpha	family	Integrin alpha cytoplasmic region	27	15
PF00361	Oxidored_q1	family	NADH-Ubiquinone/plastoquinone (complex I), various chains	33	352
PF00362	Integrin_beta	family	Integrin, beta chain	17	444
PF00363	Casein	family	Casein	15	97
PF00364	Biotin_lipoyl	domain	Biotin-requiring enzyme	49	76
PF00367	PTS_EIIB	domain	phosphotransferase system, EIIB	18	35
PF00373	Band_41	domain	FERM domain (Band 4.1 family)	8	210
PF00375	SDF	family	Sodium:dicarboxylate symporter family	12	473
PF00378	ECH	family	Enoyl-CoA hydratase/isomerase family	13	176
PF00382	TFIIB	domain	Transcription factor TFIIB repeat	12	74
PF00385	Chromo	family	'chromo' (CHRromatin Organisation MOdifier) domain	188	89
PF00386	C1q	domain	C1q domain	51	161
PF00387	PI-PLC-Y	family	Phosphatidylinositol-specific phospholipase C, Y domain	8	128
PF00388	PI-PLC-X	family	Phosphatidylinositol-specific phospholipase C, X domain	13	154
PF00389	2-Hacid_dh	domain	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	186	105
PF00394	Cu-oxidase	domain	Multicopper oxidase	73	219
PF00397	WW	domain	WW domain	78	31
PF00400	WD40	repeat	WD domain, G-beta repeat	1923	64
PF00402	Calponin	repeat	Calponin family repeat	3	26
PF00405	Transferrin	domain	Transferrin	10	350
PF00406	ADK	domain	Adenylate kinase	23	191
PF00412	LIM	domain	LIM domain	43	74
PF00413	Peptidase_M10	domain	Matrixin	69	396
PF00415	RCC1	repeat	Regulator of chromosome condensation (RCC1)	7	68
PF00418	Tubulin-binding	family	Tau and MAP protein, tubulin-binding repeat	12	35
PF00424	REV	family	REV protein (anti-repression trans-activator protein)	13	135
PF00430	ATP-synt_B	family	ATP synthase B/B' CF(0)	27	132
PF00431	CUB	domain	CUB domain	32	158
PF00433	Pkinase_C	family	Protein kinase C terminal domain	176	118
PF00435	Spectrin	repeat	Spectrin repeat	92	116
PF00439	Bromodomain	domain	Bromodomain	67	94
PF00443	UCH	family	Ubiquitin carboxyl-terminal hydrolase	62	1766
PF00447	HSF_DNA-bind	family	HSF-type DNA-binding	10	208
PF00450	Peptidase_S10	domain	Serine carboxypeptidase	86	684
PF00452	Bcl-2	family	Apoptosis regulator proteins, Bcl-2 family	14	112
PF00454	PI3_PI4_kinase	family	Phosphatidylinositol 3- and 4-kinase	46	483
PF00462	Glutaredoxin	domain	Glutaredoxin	37	132
PF00467	KOW	family	KOW motif	241	44
PF00478	IMPDH	domain	IMP dehydrogenase / GMP reductase domain	86	550
PF00479	G6PD_N	domain	Glucose-6-phosphate dehydrogenase, NAD binding domain	120	203
PF00489	IL6	domain	Interleukin-6/G-CSF/MGF family	10	158
PF00491	Arginase	domain	Arginase family	11	346
PF00493	MCM	family	MCM2/3/5 family	65	451
PF00497	SBP_bac_3	domain	Bacterial extracellular solute-binding proteins, family 3	81	297
PF00498	FHA	family	FHA domain	230	219
PF00505	HMG_box	domain	HMG (high mobility group) box	30	71
PF00514	Arm	repeat	Armadillo/beta-catenin-like repeat	248	54
PF00515	TPR_1	repeat	Tetratricopeptide repeat	569	34
PF00518	E6	family	Early Protein (E6)	26	112
PF00520	Ion_trans	family	Ion transport protein	327	424
PF00521	DNA_topoisoIV	family	DNA gyrase/topoisomerase IV, subunit A	48	556
PF00525	Crystallin	family	Alpha crystallin A chain, N terminal	13	59
PF00530	SRCR	domain	Scavenger receptor cysteine-rich domain	20	129
PF00531	Death	domain	Death domain	92	98
PF00533	BRCT	family	BRCA1 C Terminus (BRCT) domain	116	148
PF00536	SAM_1	domain	SAM domain (Sterile alpha motif)	74	72
PF00538	Linker_histone	domain	linker histone H1 and H5 family	20	86
PF00554	RHD	domain	Rel homology domain (RHD)	21	221
PF00557	Peptidase_M24	domain	metallopeptidase family M24	22	308
PF00560	LRR_1	repeat	Leucine Rich Repeat	2562	46
PF00561	Abhydrolase_1	domain	alpha/beta hydrolase fold	49	471
PF00562	RNA_pol_Rpb2_6	domain	RNA polymerase Rpb2, domain 6	57	635
PF00564	PB1	domain	PB1 domain	64	112
PF00566	TBC	family	TBC domain	3	219
PF00568	WH1	domain	WH1 domain	8	118
PF00569	ZZ	domain	Zinc finger, ZZ type	10	46
PF00571	CBS	domain	CBS domain pair	439	283
PF00576	Transthyretin	domain	Transthyretin precursor (formerly prealbumin)	28	146
PF00578	AhpC-TSA	domain	AhpC/TSA family	27	189
PF00581	Rhodanese	domain	Rhodanese-like domain	49	159
PF00583	Acetyltransf_1	family	Acetyltransferase (GNAT) family	244	150
PF00591	Glycos_transf_3	family	Glycosyl transferase family, a/b domain	25	283
PF00594	Gla	domain	Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain	29	42
PF00595	PDZ	domain	PDZ domain (Also known as DHR or GLGF)	61	114
PF00605	IRF	domain	Interferon regulatory factor transcription factor	4	111
PF00610	DEP	domain	Domain found in Dishevelled, Egl-10, and Pleckstrin	36	100
PF00611	FCH	family	Fes/CIP4 homology domain	33	116
PF00612	IQ	motif	IQ calmodulin-binding motif	356	21
PF00614	PLDc	family	Phospholipase D Active site motif	48	40
PF00615	RGS	domain	Regulator of G protein signaling domain	21	274
PF00616	RasGAP	family	GTPase-activator protein for Ras-like GTPase	8	234
PF00617	RasGEF	family	RasGEF domain	12	248
PF00618	RasGEF_N	family	Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif	12	66
PF00619	CARD	domain	Caspase recruitment domain	61	102
PF00620	RhoGAP	domain	RhoGAP domain	95	238
PF00621	RhoGEF	domain	RhoGEF domain	13	212
PF00622	SPRY	family	SPRY domain	77	240
PF00625	Guanylate_kin	family	Guanylate kinase	12	109
PF00627	UBA	domain	UBA/TS-N domain	161	45
PF00628	PHD	domain	PHD-finger	104	94
PF00629	MAM	domain	MAM domain	46	233
PF00630	Filamin	domain	Filamin/ABP280 repeat	25	108
PF00631	G-gamma	domain	GGL domain	20	58
PF00632	HECT	domain	HECT-domain (ubiquitin-transferase)	75	576
PF00633	HHH	motif	Helix-hairpin-helix motif	108	30
PF00635	Motile_Sperm	domain	MSP (Major sperm protein) domain	67	130
PF00636	Ribonuclease_3	family	RNase3 domain	175	223
PF00638	Ran_BP1	family	RanBP1 domain	8	127
PF00640	PID	domain	Phosphotyrosine interaction domain (PTB/PID)	26	187
PF00641	zf-RanBP	family	Zn-finger in Ran binding protein and others	23	33
PF00642	zf-CCCH	family	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	96	29
PF00643	zf-B_box	domain	B-box zinc finger	59	55
PF00644	PARP	family	Poly(ADP-ribose) polymerase catalytic domain	38	294
PF00645	zf-PARP	domain	Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region	14	94
PF00650	CRAL_TRIO	domain	CRAL/TRIO domain	15	192
PF00651	BTB	domain	BTB/POZ domain	102	168
PF00652	Ricin_B_lectin	domain	Ricin-type beta-trefoil lectin domain	99	200
PF00653	BIR	domain	Inhibitor of Apoptosis domain	42	113
PF00654	Voltage_CLC	family	Voltage gated chloride channel	27	496
PF00656	Peptidase_C14	domain	Caspase domain	121	671
PF00664	ABC_membrane	family	ABC transporter transmembrane region	72	378
PF00666	Cathelicidins	family	Cathelicidin	8	68
PF00667	FAD_binding_1	domain	FAD binding domain	15	242
PF00679	EFG_C	domain	Elongation factor G C-terminus	152	97
PF00681	Plectin	repeat	Plectin repeat	40	45
PF00683	TB	family	TB domain	34	53
PF00684	DnaJ_CXXCXGXG	family	DnaJ central domain (4 repeats)	22	89
PF00685	Sulfotransfer_1	domain	Sulfotransferase domain	57	445
PF00686	CBM_20	family	Starch binding domain	20	110
PF00688	TGFb_propeptide	family	TGF-beta propeptide	31	343
PF00689	Cation_ATPase_C	family	Cation transporting ATPase, C-terminus	71	287
PF00690	Cation_ATPase_N	domain	Cation transporter/ATPase, N-terminus	155	107
PF00694	Aconitase_C	domain	Aconitase C-terminal domain	19	138
PF00697	PRAI	domain	N-(5'phosphoribosyl)anthranilate (PRA) isomerase	25	252
PF00699	Urease_beta	domain	Urease beta subunit	13	106
PF00702	Hydrolase	domain	haloacid dehalogenase-like hydrolase	247	487
PF00705	PCNA_N	domain	Proliferating cell nuclear antigen, N-terminal domain	13	127
PF00735	GTP_CDC	family	Cell division protein	16	319
PF00745	GlutR_dimer	domain	Glutamyl-tRNAGlu reductase, dimerisation domain	40	111
PF00752	XPG_N	family	XPG N-terminal domain	10	111
PF00753	Lactamase_B	domain	Metallo-beta-lactamase superfamily	329	344
PF00754	F5_F8_type_C	domain	F5/8 type C domain	188	220
PF00756	Esterase	family	Putative esterase	21	337
PF00757	Furin-like	family	Furin-like cysteine rich region	12	182
PF00763	THF_DHG_CYH	family	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain	27	121
PF00769	ERM	family	Ezrin/radixin/moesin family	11	425
PF00778	DIX	family	DIX domain	8	88
PF00779	BTK	motif	BTK motif	9	37
PF00782	DSPc	domain	Dual specificity phosphatase, catalytic domain	27	234
PF00786	PBD	domain	P21-Rho-binding domain	52	84
PF00787	PX	domain	PX domain	76	315
PF00788	RA	domain	Ras association (RalGDS/AF-6) domain	59	135
PF00790	VHS	family	VHS domain	16	157
PF00791	ZU5	family	ZU5 domain	9	108
PF00801	PKD	domain	PKD domain	103	148
PF00804	Syntaxin	domain	Syntaxin	61	118
PF00805	Pentapeptide	repeat	Pentapeptide repeats (8 copies)	96	40
PF00808	CBFD_NFYB_HMF	domain	Histone-like transcription factor (CBF/NF-Y) and archaeal histone	28	69
PF00812	Ephrin	family	Ephrin	14	176
PF00822	PMP22_Claudin	family	PMP-22/EMP/MP20/Claudin family	13	198
PF00827	Ribosomal_L15e	family	Ribosomal L15	7	193
PF00831	Ribosomal_L29	family	Ribosomal L29 protein	83	60
PF00834	Ribul_P_3_epim	domain	Ribulose-phosphate 3 epimerase family	14	215
PF00837	T4_deiodinase	family	Iodothyronine deiodinase	4	283
PF00850	Hist_deacetyl	domain	Histone deacetylase domain	21	434
PF00852	Glyco_transf_10	family	Glycosyltransferase family 10 (fucosyltransferase)	5	449
PF00855	PWWP	domain	PWWP domain	15	101
PF00856	SET	family	SET domain	108	772
PF00859	CTF_NFI	family	CTF/NF-I family transcription modulation region	3	300
PF00865	Osteopontin	family	Osteopontin	7	355
PF00867	XPG_I	family	XPG I-region	16	120
PF00868	Transglut_N	domain	Transglutaminase family	17	139
PF00870	P53	domain	P53 DNA-binding domain	7	198
PF00884	Sulfatase	family	Sulfatase	66	820
PF00887	ACBP	domain	Acyl CoA binding protein	14	90
PF00888	Cullin	family	Cullin family	51	1252
PF00890	FAD_binding_2	family	FAD binding domain	66	708
PF00891	Methyltransf_2	family	O-methyltransferase	30	285
PF00899	ThiF	family	ThiF family	95	221
PF00900	Ribosomal_S4e	family	Ribosomal family S4e	13	85
PF00907	T-box	domain	T-box	22	203
PF00917	MATH	domain	MATH domain	70	196
PF00918	Gastrin	family	Gastrin/cholecystokinin family	11	135
PF00927	Transglut_C	domain	Transglutaminase family, C-terminal ig like domain	48	112
PF00928	Adap_comp_sub	family	Adaptor complexes medium subunit family	51	715
PF00929	Exonuc_X-T	family	Exonuclease	64	238
PF00932	IF_tail	family	Intermediate filament tail domain	24	127
PF00962	A_deaminase	domain	Adenosine/AMP deaminase	17	475
PF00965	TIMP	family	Tissue inhibitor of metalloproteinase	6	186
PF00970	FAD_binding_6	domain	Oxidoreductase FAD-binding domain	118	133
PF00975	Thioesterase	family	Thioesterase domain	39	305
PF00977	His_biosynth	family	Histidine biosynthesis protein	147	349
PF00989	PAS	domain	PAS fold	49	134
PF00992	Troponin	family	Troponin	21	147
PF00993	MHC_II_alpha	domain	Class II histocompatibility antigen, alpha domain	51	85
PF00994	MoCF_biosynth	domain	Probable molybdopterin binding domain	154	287
PF00995	Sec1	family	Sec1 family	17	735
PF00996	GDI	family	GDP dissociation inhibitor	10	491
PF01005	Flavi_NS2A	family	Flavivirus non-structural protein NS2A	7	218
PF01007	IRK	family	Inward rectifier potassium channel	14	378
PF01017	STAT_alpha	family	STAT protein, all-alpha domain	9	209
PF01023	S_100	domain	S-100/ICaBP type calcium binding domain	27	44
PF01025	GrpE	family	GrpE	28	209
PF01030	Recep_L_domain	domain	Receptor L domain	71	172
PF01031	Dynamin_M	family	Dynamin central region	21	304
PF01035	DNA_binding_1	domain	6-O-methylguanine DNA methyltransferase, DNA binding domain	16	89
PF01044	Vinculin	family	Vinculin family	10	1289
PF01048	PNP_UDP_1	domain	Phosphorylase family	16	276
PF01049	Cadherin_C	family	Cadherin cytoplasmic region	20	169
PF01056	Myc_N	family	Myc amino-terminal region	9	432
PF01064	Activin_recp	domain	Activin types I and II receptor domain	24	127
PF01068	DNA_ligase_A_M	domain	ATP dependent DNA ligase domain	46	300
PF01073	3Beta_HSD	family	3-beta hydroxysteroid dehydrogenase/isomerase family	12	307
PF01078	Mg_chelatase	family	Magnesium chelatase, subunit ChlI	21	362
PF01086	Clathrin_lg_ch	family	Clathrin light chain	3	252
PF01092	Ribosomal_S6e	family	Ribosomal protein S6e	7	127
PF01093	Clusterin	family	Clusterin	5	457
PF01094	ANF_receptor	family	Receptor family ligand binding region	132	749
PF01101	HMG14_17	family	HMG14 and HMG17	5	107
PF01122	Cobalamin_bind	family	Eukaryotic cobalamin-binding protein	5	451
PF01126	Heme_oxygenase	domain	Heme oxygenase	18	262
PF01127	Sdh_cyt	family	Succinate dehydrogenase cytochrome b subunit	42	128
PF01131	Topoisom_bac	family	DNA topoisomerase	23	520
PF01133	ER	family	Enhancer of rudimentary	4	103
PF01134	GIDA	family	Glucose inhibited division protein A	123	528
PF01135	PCMT	family	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	9	232
PF01139	UPF0027	family	Uncharacterized protein family UPF0027	32	570
PF01145	Band_7	family	SPFH domain / Band 7 family	79	284
PF01146	Caveolin	family	Caveolin	5	177
PF01148	CTP_transf_1	family	Cytidylyltransferase family	49	393
PF01150	GDA1_CD39	family	GDA1/CD39 (nucleoside phosphatase) family	9	560
PF01158	Ribosomal_L36e	family	Ribosomal protein L36e	5	109
PF01163	RIO1	family	RIO1 family	29	233
PF01166	TSC22	family	TSC-22/dip/bun family	4	60
PF01168	Ala_racemase_N	domain	Alanine racemase, N-terminal domain	64	268
PF01170	UPF0020	domain	Putative RNA methylase family UPF0020	18	227
PF01187	MIF	domain	Macrophage migration inhibitory factor (MIF)	6	115
PF01192	RNA_pol_Rpb6	family	RNA polymerase Rpb6	34	59
PF01202	SKI	domain	Shikimate kinase	100	263
PF01216	Calsequestrin	family	Calsequestrin	3	386
PF01221	Dynein_light	domain	Dynein light chain type 1	6	96
PF01230	HIT	domain	HIT domain	26	114
PF01233	NMT	domain	Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain	6	164
PF01237	Oxysterol_BP	family	Oxysterol-binding protein	7	441
PF01242	PTPS	domain	6-pyruvoyl tetrahydropterin synthase	4	144
PF01246	Ribosomal_L24e	family	Ribosomal protein L24e	7	71
PF01265	Cyto_heme_lyase	family	Cytochrome c/c1 heme lyase	6	283
PF01266	DAO	domain	FAD dependent oxidoreductase	545	1815
PF01268	FTHFS	family	Formate--tetrahydrofolate ligase	8	635
PF01269	Fibrillarin	domain	Fibrillarin	10	240
PF01271	Granin	family	Granin (chromogranin or secretogranin)	9	707
PF01275	Myelin_PLP	family	Myelin proteolipid protein (PLP or lipophilin)	7	288
PF01286	XPA_N	domain	XPA protein N-terminal	6	34
PF01296	Galanin	family	Galanin	4	29
PF01297	SBP_bac_9	family	Periplasmic solute binding protein family	22	359
PF01299	Lamp	family	Lysosome-associated membrane glycoprotein (Lamp)	10	396
PF01302	CAP_GLY	domain	CAP-Gly domain	43	92
PF01305	Ribosomal_L15	family	Ribosomal protein L15 amino terminal region	9	113
PF01306	LacY_symp	family	LacY proton/sugar symporter	4	415
PF01331	mRNA_cap_enzyme	domain	mRNA capping enzyme, catalytic domain	12	215
PF01335	DED	domain	Death effector domain	40	95
PF01343	Peptidase_S49	family	Peptidase family S49	20	159
PF01344	Kelch_1	repeat	Kelch motif	230	70
PF01346	FKBP_N	family	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase	13	131
PF01352	KRAB	family	KRAB box	77	41
PF01363	FYVE	domain	FYVE zinc finger	23	102
PF01365	RYDR_ITPR	family	RIH domain	18	250
PF01367	5_3_exonuc	domain	5'-3' exonuclease, C-terminal SAM fold	27	120
PF01368	DHH	family	DHH family	155	274
PF01369	Sec7	domain	Sec7 domain	11	233
PF01370	Epimerase	family	NAD dependent epimerase/dehydratase family	106	413
PF01390	SEA	family	SEA domain	21	136
PF01391	Collagen	repeat	Collagen triple helix repeat (20 copies)	41	60
PF01393	Chromo_shadow	domain	Chromo shadow domain	11	63
PF01396	zf-C4_Topoisom	family	Topoisomerase DNA binding C4 zinc finger	27	43
PF01401	Peptidase_M2	family	Angiotensin-converting enzyme	6	600
PF01403	Sema	family	Sema domain	27	549
PF01404	Ephrin_lbd	domain	Ephrin receptor ligand binding domain	15	199
PF01406	tRNA-synt_1e	family	tRNA synthetases class I (C) catalytic domain	12	442
PF01408	GFO_IDH_MocA	family	Oxidoreductase family, NAD-binding Rossmann fold	49	165
PF01410	COLFI	family	Fibrillar collagen C-terminal domain	12	227
PF01412	ArfGap	domain	Putative GTPase activating protein for Arf	23	148
PF01413	C4	domain	C-terminal tandem repeated domain in type 4 procollagen	26	118
PF01414	DSL	domain	Delta serrate ligand	18	67
PF01421	Reprolysin	domain	Reprolysin (M12B) family zinc metalloprotease	39	215
PF01423	LSM	domain	LSM domain	132	116
PF01424	R3H	family	R3H domain	37	64
PF01426	BAH	domain	BAH domain	45	342
PF01428	zf-AN1	family	AN1-like Zinc finger	9	44
PF01429	MBD	domain	Methyl-CpG binding domain	18	152
PF01431	Peptidase_M13	family	Peptidase family M13	25	254
PF01436	NHL	repeat	NHL repeat	114	34
PF01437	PSI	family	Plexin repeat	98	127
PF01440	Gemini_AL2	family	Geminivirus AL2 protein	26	139
PF01442	Apolipoprotein	domain	Apolipoprotein A1/A4/E family	21	284
PF01448	ELM2	family	ELM2 domain	19	145
PF01454	MAGE	family	MAGE family	14	307
PF01456	Mucin	family	Mucin-like glycoprotein	6	213
PF01459	Porin_3	family	Eukaryotic porin	22	356
PF01462	LRRNT	family	Leucine rich repeat N-terminal domain	26	37
PF01463	LRRCT	family	Leucine rich repeat C-terminal domain	61	30
PF01471	PG_binding_1	domain	Putative peptidoglycan binding domain	17	73
PF01472	PUA	family	PUA domain	109	98
PF01477	PLAT	domain	PLAT/LH2 domain	75	159
PF01479	S4	family	S4 domain	158	52
PF01485	IBR	family	IBR domain	30	116
PF01486	K-box	family	K-box region	68	110
PF01488	Shikimate_DH	family	Shikimate / quinate 5-dehydrogenase	59	184
PF01490	Aa_trans	family	Transmembrane amino acid transporter protein	27	555
PF01494	FAD_binding_3	family	FAD binding domain	21	461
PF01500	Keratin_B2	family	Keratin, high sulfur B2 protein	9	194
PF01503	PRA-PH	family	Phosphoribosyl-ATP pyrophosphohydrolase	17	97
PF01505	Vault	repeat	Major Vault Protein repeat	19	66
PF01509	TruB_N	family	TruB family pseudouridylate synthase (N terminal domain)	17	162
PF01519	DUF16	family	Protein of unknown function DUF16	18	211
PF01525	Rota_NS26	family	Rotavirus NS26	2	223
PF01527	Transposase_8	family	Transposase	47	106
PF01530	zf-C2HC	family	Zinc finger, C2HC type	16	32
PF01534	Frizzled	family	Frizzled/Smoothened family membrane region	13	381
PF01540	Lipoprotein_7	family	Adhesin lipoprotein	3	474
PF01556	DnaJ_C	family	DnaJ C terminal region	35	133
PF01562	Pep_M12B_propep	family	Reprolysin family propeptide	37	130
PF01576	Myosin_tail_1	family	Myosin tail	15	863
PF01582	TIR	family	TIR domain	46	180
PF01585	G-patch	family	G-patch domain	64	68
PF01596	Methyltransf_3	domain	O-methyltransferase	8	216
PF01602	Adaptin_N	family	Adaptin N terminal region	33	815
PF01607	CBM_14	domain	Chitin binding Peritrophin-A domain	212	95
PF01608	I_LWEQ	family	I/LWEQ domain	8	203
PF01612	3_5_exonuc	domain	3'-5' exonuclease	28	229
PF01618	MotA_ExbB	family	MotA/TolQ/ExbB proton channel family	28	148
PF01636	APH	family	Phosphotransferase enzyme family	278	750
PF01645	Glu_synthase	family	Conserved region in glutamate synthase	15	430
PF01648	ACPS	family	4'-phosphopantetheinyl transferase superfamily	43	94
PF01650	Peptidase_C13	family	Peptidase C13 family	24	467
PF01652	IF4E	domain	Eukaryotic initiation factor 4E	13	279
PF01663	Phosphodiest	family	Type I phosphodiesterase / nucleotide pyrophosphatase	72	714
PF01678	DAP_epimerase	domain	Diaminopimelate epimerase	28	154
PF01680	SOR_SNZ	family	SOR/SNZ family	10	227
PF01681	C6	family	C6 domain	21	117
PF01683	EB	family	EB module	23	76
PF01728	FtsJ	family	FtsJ-like methyltransferase	34	307
PF01731	Arylesterase	family	Arylesterase	7	377
PF01734	Patatin	family	Patatin-like phospholipase	56	355
PF01745	IPT	family	Isopentenyl transferase	7	240
PF01751	Toprim	family	Toprim domain	119	212
PF01753	zf-MYND	family	MYND finger	19	44
PF01754	zf-A20	family	A20-like zinc finger	11	26
PF01759	NTR	family	UNC-6/NTR/C345C module	42	202
PF01805	Surp	family	Surp module	65	55
PF01813	ATP-synt_D	family	ATP synthase subunit D	18	202
PF01815	Rop	domain	Rop protein	3	65
PF01821	ANATO	domain	Anaphylotoxin-like domain	19	39
PF01823	MACPF	domain	MAC/Perforin domain	21	263
PF01825	GPS	family	Latrophilin/CL-1-like GPS domain	19	61
PF01826	TIL	domain	Trypsin Inhibitor like cysteine rich domain	53	82
PF01833	TIG	domain	IPT/TIG domain	111	178
PF01834	XRCC1_N	domain	XRCC1 N terminal domain	3	155
PF01835	A2M_N	domain	Alpha-2-macroglobulin family N-terminal region	53	394
PF01839	FG-GAP	repeat	FG-GAP repeat	476	67
PF01841	Transglut_core	family	Transglutaminase-like superfamily	38	95
PF01843	DIL	family	DIL domain	26	126
PF01857	RB_B	domain	Retinoblastoma-associated protein B domain	7	171
PF01858	RB_A	domain	Retinoblastoma-associated protein A domain	8	219
PF01873	eIF-5_eIF-2B	family	Domain found in IF2B/IF5	13	138
PF01889	DUF63	family	Membrane protein of unknown function DUF63	5	275
PF01891	CbiM	family	CbiM	12	198
PF01909	NTP_transf_2	family	Nucleotidyltransferase domain	122	155
PF01920	KE2	family	KE2 family protein	62	111
PF01926	MMR_HSR1	family	GTPase of unknown function	797	369
PF01935	DUF87	family	Domain of unknown function DUF87	10	397
PF01940	DUF92	family	Integral membrane protein DUF92	5	250
PF01966	HD	family	HD domain	162	217
PF01968	Hydantoinase_A	family	Hydantoinase/oxoprolinase	62	565
PF01988	DUF125	family	Integral membrane protein DUF125	37	235
PF01997	Translin	family	Translin family	7	224
PF02008	zf-CXXC	domain	CXXC zinc finger	14	50
PF02012	BNR	repeat	BNR/Asp-box repeat	188	12
PF02014	Reeler	family	Reeler domain	11	155
PF02017	CIDE-N	domain	CIDE-N domain	7	80
PF02020	W2	family	eIF4-gamma/eIF5/eIF2-epsilon	19	87
PF02023	SCAN	family	SCAN domain	10	96
PF02028	BCCT	family	BCCT family transporter	6	499
PF02029	Caldesmon	family	Caldesmon	2	806
PF02037	SAP	family	SAP domain	56	35
PF02045	CBFB_NFYA	family	CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B	10	61
PF02063	MARCKS	family	MARCKS family	4	342
PF02065	Melibiase	family	Melibiase	13	456
PF02067	Metallothio_5	family	Metallothionein family 5	2	41
PF02068	Metallothio_PEC	family	Plant PEC family metallothionein	4	80
PF02069	Metallothio_Pro	family	Prokaryotic metallothionein	2	53
PF02078	Synapsin_N	domain	Synapsin, N-terminal domain	4	106
PF02096	60KD_IMP	family	60Kd inner membrane protein	22	256
PF02099	Josephin	family	Josephin	4	205
PF02118	Srg	family	C.elegans Srg family integral membrane protein	10	315
PF02120	Flg_hook	domain	Flagellar hook-length control protein	15	150
PF02121	IP_trans	family	Phosphatidylinositol transfer protein	5	265
PF02124	Marek_A	family	Marek's disease glycoprotein A	2	474
PF02133	Transp_cyt_pur	family	Permease for cytosine/purines, uracil, thiamine, allantoin	16	479
PF02134	UBACT	family	Repeat in ubiquitin-activating (UBA) protein	31	80
PF02135	zf-TAZ	family	TAZ zinc finger	9	97
PF02136	NTF2	domain	Nuclear transport factor 2 (NTF2) domain	47	158
PF02145	Rap_GAP	family	Rap/ran-GAP	7	193
PF02146	SIR2	family	Sir2 family	21	261
PF02148	zf-UBP	domain	Zn-finger in ubiquitin-hydrolases and other protein	20	92
PF02159	Oest_recep	family	Oestrogen receptor	3	185
PF02161	Prog_receptor	family	Progesterone receptor	3	570
PF02165	WT1	family	Wilm's tumour protein	2	322
PF02166	Androgen_recep	family	Androgen receptor	3	460
PF02167	Cytochrom_C1	family	Cytochrome C1 family	14	299
PF02170	PAZ	family	PAZ domain	59	215
PF02172	KIX	domain	KIX domain	8	82
PF02173	pKID	family	pKID domain	11	45
PF02174	IRS	domain	PTB domain (IRS-1 type)	10	116
PF02176	zf-TRAF	family	TRAF-type zinc finger	14	60
PF02177	A4_EXTRA	family	Amyloid A4 extracellular domain	5	182
PF02178	AT_hook	motif	AT hook motif	43	13
PF02179	BAG	family	BAG domain	16	92
PF02180	BH4	family	Bcl-2 homology region 4	7	27
PF02181	FH2	family	Formin Homology 2 Domain	52	641
PF02183	HALZ	family	Homeobox associated leucine zipper	28	45
PF02185	HR1	family	Hr1 repeat	15	89
PF02188	GoLoco	motif	GoLoco motif	16	24
PF02189	ITAM	motif	Immunoreceptor tyrosine-based activation motif	12	22
PF02190	LON	family	ATP-dependent protease La (LON) domain	10	349
PF02196	RBD	domain	Raf-like Ras-binding domain	11	78
PF02197	RIIa	domain	Regulatory subunit of type II PKA R-subunit	13	39
PF02198	SAM_PNT	domain	Sterile alpha motif (SAM)/Pointed domain	17	94
PF02199	SapA	family	Saposin A-type domain	6	34
PF02201	SWIB	domain	SWIB/MDM2 domain	42	83
PF02205	WH2	family	WH2 motif	30	21
PF02210	Laminin_G_2	domain	Laminin G domain	252	273
PF02212	GED	family	Dynamin GTPase effector domain	19	98
PF02214	K_tetra	domain	K+ channel tetramerisation domain	47	116
PF02221	E1_DerP2_DerF2	domain	ML domain	34	171
PF02225	PA	family	PA domain	144	151
PF02229	PC4	domain	Transcriptional Coactivator p15 (PC4)	6	93
PF02230	Abhydrolase_2	domain	Phospholipase/Carboxylesterase	14	243
PF02234	CDI	family	Cyclin-dependent kinase inhibitor	22	63
PF02251	PA28_alpha	family	Proteasome activator pa28 alpha subunit	4	64
PF02259	FAT	family	FAT domain	35	638
PF02260	FATC	family	FATC domain	14	33
PF02263	GBP	domain	Guanylate-binding protein, N-terminal domain	14	303
PF02285	COX8	family	Cytochrome oxidase c subunit VIII	6	44
PF02296	Alpha_adaptin_C	family	Alpha adaptin AP2, C-terminal domain	4	113
PF02318	RPH3A_effector	family	Rabphilin-3A effector domain	3	310
PF02319	E2F_TDP	domain	E2F/DP family winged-helix DNA-binding domain	36	118
PF02326	YMF19	family	YMF19 hypothetical plant mitochondrial protein	9	96
PF02338	OTU	family	OTU-like cysteine protease	55	223
PF02345	TIL_assoc	family	TILa domain	20	56
PF02366	PMT	family	Dolichyl-phosphate-mannose-protein mannosyltransferase	24	292
PF02367	UPF0079	family	Uncharacterised P-loop hydrolase UPF0079	15	146
PF02373	JmjC	family	JmjC domain	36	175
PF02377	Dishevelled	family	Dishevelled specific domain	5	74
PF02389	Cornifin	family	Cornifin (SPRR) family	5	268
PF02390	Methyltransf_4	family	Putative methyltransferase	19	294
PF02403	Seryl_tRNA_N	domain	Seryl-tRNA synthetase N-terminal domain	95	121
PF02404	SCF	family	Stem cell factor	4	288
PF02405	DUF140	family	Domain of unknown function DUF140	17	270
PF02430	AMA-1	family	Apical membrane antigen 1	4	623
PF02437	Ski_Sno	family	SKI/SNO/DAC family	5	116
PF02439	Adeno_E3_CR2	family	Adenovirus E3 region protein CR2	5	48
PF02440	Adeno_E3_CR1	family	Adenovirus E3 region protein CR1	6	78
PF02453	Reticulon	family	Reticulon	13	208
PF02463	SMC_N	family	RecF/RecN/SMC N terminal domain	29	391
PF02475	Met_10	family	Met-10+ like-protein	12	271
PF02491	FtsA	domain	Cell division protein FtsA	39	236
PF02493	MORN	repeat	MORN repeat	326	24
PF02494	HYR	domain	HYR domain	19	87
PF02496	ABA_WDS	family	ABA/WDS induced protein	7	54
PF02513	Spin-Ssty	repeat	Spin/Ssty Family	9	50
PF02518	HATPase_c	domain	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	669	341
PF02536	mTERF	family	mTERF	16	382
PF02545	Maf	domain	Maf-like protein	12	227
PF02572	CobA_CobO_BtuR	family	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP	3	178
PF02575	DUF149	family	Uncharacterised BCR, YbaB family COG0718	30	97
PF02609	Exonuc_VII_S	family	Exonuclease VII small subunit	20	65
PF02627	CMD	family	Carboxymuconolactone decarboxylase family	219	104
PF02662	FlpD	family	Methyl-viologen-reducing hydrogenase, delta subunit	6	127
PF02668	TauD	family	Taurine catabolism dioxygenase TauD, TfdA family	4	301
PF02673	BacA	family	Bacitracin resistance protein BacA	22	290
PF02678	Pirin	family	Pirin	55	139
PF02680	DUF211	family	Uncharacterized ArCR, COG1888	4	95
PF02711	Pap_E4	family	E4 protein	13	109
PF02719	Polysacc_synt_2	family	Polysaccharide biosynthesis protein	79	334
PF02724	CDC45	family	CDC45-like protein	7	833
PF02731	SKIP_SNW	family	SKIP/SNW domain	7	173
PF02732	ERCC4	domain	ERCC4 domain	13	107
PF02735	Ku	domain	Ku70/Ku80 beta-barrel domain	29	332
PF02736	Myosin_N	domain	Myosin N-terminal SH3-like domain	47	56
PF02737	3HCDH_N	domain	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain	77	213
PF02747	PCNA_C	domain	Proliferating cell nuclear antigen, C-terminal domain	12	128
PF02750	Synapsin_C	domain	Synapsin, ATP binding domain	4	203
PF02762	Cbl_N3	domain	CBL proto-oncogene N-terminus, SH2-like domain	3	86
PF02767	DNA_pol3_beta_2	domain	DNA polymerase III beta subunit, central domain	15	130
PF02777	Sod_Fe_C	domain	Iron/manganese superoxide dismutases, C-terminal domain	27	120
PF02781	G6PD_C	domain	Glucose-6-phosphate dehydrogenase, C-terminal domain	12	311
PF02784	Orn_Arg_deC_N	domain	Pyridoxal-dependent decarboxylase, pyridoxal binding domain	17	294
PF02793	HRM	family	Hormone receptor domain	50	102
PF02799	NMT_C	domain	Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain	6	253
PF02806	Alpha-amylase_C	domain	Alpha amylase, C-terminal all-beta domain	44	97
PF02807	ATP-gua_PtransN	domain	ATP:guanido phosphotransferase, N-terminal domain	6	84
PF02809	UIM	motif	Ubiquitin interaction motif	47	18
PF02810	SEC-C	family	SEC-C motif	18	21
PF02815	MIR	domain	MIR domain	31	296
PF02817	E3_binding	family	e3 binding domain	61	43
PF02819	Toxin_9	family	Spider toxin	6	47
PF02820	MBT	family	mbt repeat	21	81
PF02824	TGS	family	TGS domain	63	84
PF02825	WWE	family	WWE domain	16	97
PF02826	2-Hacid_dh_C	domain	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	173	254
PF02828	L27	family	L27 domain	20	60
PF02841	GBP_C	domain	Guanylate-binding protein, C-terminal domain	6	305
PF02845	CUE	family	CUE domain	24	43
PF02847	MA3	family	MA3 domain	31	136
PF02852	Pyr_redox_dim	domain	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	104	141
PF02854	MIF4G	family	MIF4G domain	46	375
PF02864	STAT_bind	domain	STAT protein, DNA binding domain	9	269
PF02865	STAT_int	domain	STAT protein, protein interaction domain	59	134
PF02866	Ldh_1_C	domain	lactate/malate dehydrogenase, alpha/beta C-terminal domain	30	211
PF02870	Methyltransf_1N	domain	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain	11	92
PF02874	ATP-synt_ab_N	domain	ATP synthase alpha/beta family, beta-barrel domain	198	88
PF02877	PARP_reg	domain	Poly(ADP-ribose) polymerase, regulatory domain	5	139
PF02882	THF_DHG_CYH_C	domain	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain	92	205
PF02883	Alpha_adaptinC2	domain	Adaptin C-terminal domain	24	137
PF02885	Glycos_trans_3N	domain	Glycosyl transferase family, helical bundle domain	25	80
PF02891	zf-MIZ	domain	MIZ zinc finger	9	53
PF02892	zf-BED	domain	BED zinc finger	33	65
PF02898	NO_synthase	domain	Nitric oxide synthase, oxygenase domain	8	374
PF02912	Phe_tRNA-synt_N	domain	Aminoacyl tRNA synthetase class II, N-terminal domain	53	74
PF02922	Isoamylase_N	domain	Isoamylase N-terminal domain	60	135
PF02931	Neur_chan_LBD	family	Neurotransmitter-gated ion-channel ligand binding domain	115	320
PF02932	Neur_chan_memb	family	Neurotransmitter-gated ion-channel transmembrane region	50	528
PF02935	COX7C	family	Cytochrome c oxidase subunit VIIc	4	83
PF02936	COX4	family	Cytochrome c oxidase subunit IV	10	146
PF02944	BESS	motif	BESS motif	19	40
PF02946	GTF2I	family	GTF2I-like repeat	11	76
PF02953	zf-Tim10_DDP	domain	Tim10/DDP family zinc finger	22	67
PF02971	FTCD	domain	Formiminotransferase domain	5	151
PF02984	Cyclin_C	domain	Cyclin, C-terminal domain	142	192
PF02985	HEAT	repeat	HEAT repeat	748	48
PF02988	PLA2_inh	family	Phospholipase A2 inhibitor	5	203
PF02991	MAP1_LC3	family	Microtubule associated protein 1A/1B, light chain 3	10	117
PF02996	Prefoldin	family	Prefoldin subunit	38	133
PF03006	HlyIII	family	Haemolysin-III related	89	457
PF03020	LEM	domain	LEM domain	9	45
PF03023	MVIN	family	MviN-like protein	15	530
PF03028	Dynein_heavy	family	Dynein heavy chain	21	861
PF03029	ATP_bind_1	family	Conserved hypothetical ATP binding protein	34	321
PF03035	RNA_capsid	family	Calicivirus putative RNA polymerase/capsid protein	14	294
PF03039	IL12	domain	Interleukin-12 alpha subunit	3	226
PF03047	ComC	family	COMC family	12	55
PF03060	NPD	family	2-nitropropane dioxygenase	12	445
PF03086	DUF240	family	MG032/MG096/MG288 family 2	13	123
PF03088	Str_synth	family	Strictosidine synthase	8	409
PF03096	Ndr	family	Ndr family	10	303
PF03098	An_peroxidase	family	Animal haem peroxidase	17	669
PF03104	DNA_pol_B_exo	family	DNA polymerase family B, exonuclease domain	39	556
PF03105	SPX	domain	SPX domain	27	457
PF03107	C1_2	domain	C1 domain	97	46
PF03114	BAR	domain	BAR domain	29	277
PF03124	EXS	family	EXS family	14	230
PF03127	GAT	domain	GAT domain	9	108
PF03131	bZIP_Maf	family	bZIP Maf transcription factor	13	97
PF03133	TTL	family	Tubulin-tyrosine ligase family	23	403
PF03144	GTP_EFTU_D2	domain	Elongation factor Tu domain 2	316	112
PF03145	Sina	family	Seven in absentia protein family	6	211
PF03148	Tektin	family	Tektin family	10	394
PF03151	DUF250	family	Domain of unknown function, DUF250	63	211
PF03153	TFIIA	family	Transcription factor IIA, alpha/beta subunit	7	489
PF03154	Atrophin-1	family	Atrophin-1 family	2	1064
PF03169	OPT	family	OPT oligopeptide transporter protein	26	775
PF03175	DNA_pol_B_2	family	DNA polymerase type B, organellar and viral	36	691
PF03179	V-ATPase_G	family	Vacuolar (H+)-ATPase G subunit	13	109
PF03188	Cytochrom_B561	family	Cytochrome b561	13	247
PF03193	DUF258	family	Protein of unknown function, DUF258	75	420
PF03208	PRA1	family	PRA1 family protein	23	217
PF03215	Rad17	family	Rad17 cell cycle checkpoint protein	4	545
PF03223	V-ATPase_C	family	V-ATPase subunit C	5	386
PF03224	V-ATPase_H	family	V-ATPase subunit H	6	454
PF03226	Yippee	family	Yippee putative zinc-binding protein	8	114
PF03229	Alpha_GJ	family	Alphavirus glycoprotein J	5	130
PF03234	CDC37	domain	Cdc37 family	7	322
PF03250	Tropomodulin	family	Tropomodulin	8	460
PF03280	Lipase_chap	family	Proteobacterial lipase chaperone protein	8	294
PF03302	VSP	family	Giardia variant-specific surface protein	6	412
PF03311	Cornichon	family	Cornichon protein	9	147
PF03318	ETX_MTX2	family	Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2	3	333
PF03323	GerA	family	Bacillus/Clostridium GerA spore germination protein	10	503
PF03357	SNF7	family	SNF7	38	208
PF03363	Herpes_LP	family	Herpesvirus leader protein	3	178
PF03366	YEATS	family	YEATS family	25	91
PF03368	DUF283	domain	Domain of unknown function	5	99
PF03370	CBM_21	family	Putative phosphatase regulatory subunit	8	124
PF03372	Exo_endo_phos	domain	Endonuclease/Exonuclease/phosphatase family	174	1003
PF03378	CAS_CSE1	family	CAS/CSE protein, C-terminus	4	451
PF03401	Bug	family	Bordetella uptake gene (bug) product	10	281
PF03436	DUF281	family	Domain of unknown function (DUF281)	6	76
PF03446	NAD_binding_2	domain	NAD binding domain of 6-phosphogluconate dehydrogenase	185	238
PF03453	MoeA_N	family	MoeA N-terminal region (domain I and II)	58	213
PF03454	MoeA_C	domain	MoeA C-terminal region (domain IV)	48	87
PF03460	NIR_SIR_ferr	repeat	Nitrite/Sulfite reductase ferredoxin-like half domain	117	85
PF03463	eRF1_1	domain	eRF1 domain 1	32	138
PF03467	Smg4_UPF3	family	Smg-4/UPF3 family	6	224
PF03474	DMA	motif	DMRTA motif	5	39
PF03486	HI0933_like	family	HI0933-like protein	49	447
PF03489	SapB_2	family	Saposin-like type B, region 2	105	38
PF03494	Beta-APP	family	Beta-amyloid peptide (beta-APP)	2	39
PF03516	Filaggrin	repeat	Filaggrin	5	55
PF03521	Kv2channel	family	Kv2 voltage-gated K+ channel	4	290
PF03527	RHS	family	RHS protein	4	47
PF03528	Rabaptin	family	Rabaptin	3	151
PF03529	TF_Otx	family	Otx1 transcription factor	7	102
PF03542	Tuberin	family	Tuberin	2	333
PF03547	Auxin_eff	family	Auxin Efflux Carrier	27	791
PF03567	Sulfotransfer_2	family	Sulfotransferase	8	362
PF03595	C4dic_mal_tran	family	C4-dicarboxylate transporter/malic acid transport protein	51	496
PF03600	CitMHS	family	Citrate transporter	31	603
PF03601	Cons_hypoth698	family	Conserved hypothetical protein 698	13	348
PF03602	Cons_hypoth95	family	Conserved hypothetical protein 95	29	212
PF03604	DNA_RNApol_7kD	domain	DNA directed RNA polymerase, 7 kDa subunit	6	32
PF03609	EII-Sor	family	PTS system sorbose-specific iic component	17	244
PF03623	Focal_AT	domain	Focal adhesion targeting region	3	139
PF03627	PapG_N	domain	PapG carbohydrate binding domain	4	231
PF03638	CXC	domain	Tesmin/TSO1-like CXC domain	15	42
PF03661	UPF0121	family	Uncharacterised protein family (UPF0121)	3	253
PF03672	UPF0154	family	Uncharacterised protein family (UPF0154)	5	64
PF03704	BTAD	family	Bacterial transcriptional activator domain	67	164
PF03713	DUF305	domain	Domain of unknown function (DUF305)	12	57
PF03730	Ku_C	family	Ku70/Ku80 C-terminal arm	21	109
PF03731	Ku_N	domain	Ku70/Ku80 N-terminal alpha/beta domain	17	286
PF03732	Retrotrans_gag	family	Retrotransposon gag protein	62	132
PF03741	TerC	family	Integral membrane protein TerC family	23	125
PF03745	DUF309	family	Domain of unknown function (DUF309)	11	93
PF03747	ADP_ribosyl_GH	family	ADP-ribosylglycohydrolase	23	460
PF03791	KNOX2	family	KNOX2 domain	20	56
PF03810	IBN_N	domain	Importin-beta N-terminal domain	53	104
PF03819	MazG	domain	MazG nucleotide pyrophosphohydrolase domain	55	98
PF03824	NicO	family	High-affinity nickel-transport protein	22	348
PF03826	OAR	domain	OAR domain	13	21
PF03832	PkinA_anch	motif	Protein kinase A anchor	8	31
PF03834	Rad10	family	DNA repair protein rad10	7	76
PF03836	RasGAP_C	family	RasGAP C-terminus	9	150
PF03845	Spore_permease	family	Spore germination protein	17	337
PF03854	zf-P11	family	P-11 zinc finger	3	50
PF03879	Cgr1	family	Cgr1 family	4	112
PF03891	DUF333	domain	Domain of unknown function (DUF333)	6	79
PF03894	XFP	family	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase	6	825
PF03909	BSD	domain	BSD domain	55	76
PF03915	AIP3	family	Actin interacting protein 3	3	471
PF03920	TLE_N	family	Groucho/TLE N-terminal Q-rich domain	6	180
PF03921	ICAM_N	family	Intercellular adhesion molecule (ICAM), N-terminal domain	5	113
PF03938	OmpH	domain	Outer membrane protein (OmpH-like)	13	198
PF03940	MSSP	family	Male specific sperm protein	3	65
PF03953	Tubulin_C	domain	Tubulin/FtsZ family, C-terminal domain	110	177
PF03954	Lectin_N	family	Hepatic lectin, N-terminal domain	5	168
PF03955	Adeno_PIX	family	Adenovirus hexon-associated protein (IX)	11	114
PF03957	Jun	family	Jun-like transcription factor	8	314
PF03958	Secretin_N	domain	Bacterial type II/III secretion system short domain	234	166
PF03962	Mnd1	family	Mnd1 family	3	193
PF03977	OAD_beta	family	Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit	9	437
PF03993	DUF349	domain	Domain of Unknown Function (DUF349)	4	82
PF04005	Hus1	family	Hus1-like protein	5	328
PF04006	Mpp10	family	Mpp10 protein	6	719
PF04012	PspA_IM30	family	PspA/IM30 family	11	257
PF04032	Rpr2	family	RNAse P Rpr2/Rpp21 subunit domain	13	118
PF04043	PMEI	domain	Plant invertase/pectin methylesterase inhibitor	127	364
PF04045	P34-Arc	family	Arp2/3 complex, 34 kD subunit p34-Arc	5	270
PF04048	Sec8_exocyst	domain	Sec8 exocyst complex component specific domain	6	170
PF04055	Radical_SAM	domain	Radical SAM superfamily	651	439
PF04059	RRM_2	family	RNA recognition motif 2	4	97
PF04084	ORC2	family	Origin recognition complex subunit 2	5	348
PF04087	DUF389	family	Domain of unknown function (DUF389)	18	172
PF04089	BRICHOS	domain	BRICHOS domain	16	109
PF04103	CD20	family	CD20/IgE Fc receptor beta subunit family	16	177
PF04110	APG12	family	Autophagy protein Apg12	6	107
PF04135	Nop10p	family	Nucleolar RNA-binding protein, Nop10p family	10	59
PF04152	Mre11_DNA_bind	domain	Mre11 DNA-binding presumed domain	10	247
PF04156	IncA	family	IncA protein	32	285
PF04172	LrgB	family	LrgB-like family	39	227
PF04177	TAP42	family	TAP42-like family	9	427
PF04178	Got1	family	Got1-like family	7	101
PF04181	DUF408	family	Domain of Unknown Function (DUF408)	4	224
PF04186	FxsA	family	FxsA cytoplasmic membrane protein	10	126
PF04212	MIT	domain	MIT domain	32	30
PF04215	SgaT_UlaA	family	Putative sugar-specific permease, SgaT/UlaA	6	470
PF04253	TFR_dimer	domain	Transferrin receptor-like dimerisation domain	12	154
PF04282	DUF438	family	Family of unknown function (DUF438)	11	88
PF04304	DUF454	family	Protein of unknown function (DUF454)	11	78
PF04316	FlgM	family	Anti-sigma-28 factor, FlgM	12	96
PF04321	RmlD_sub_bind	domain	RmlD substrate binding domain	38	357
PF04325	DUF465	family	Protein of unknown function (DUF465)	16	65
PF04352	ProQ	domain	ProQ activator of osmoprotectant transporter ProP	4	174
PF04363	DUF496	family	Protein of unknown function (DUF496)	5	95
PF04373	DUF511	family	Protein of unknown function (DUF511)	4	320
PF04380	DUF526	family	Protein of unknown function (DUF526)	6	96
PF04382	SAB	domain	SAB domain	6	72
PF04389	Peptidase_M28	family	Peptidase family M28	77	357
PF04394	DUF536	family	Protein of unknown function, DUF536	50	67
PF04415	DUF515	family	Protein of unknown function (DUF515)	3	455
PF04433	SWIRM	domain	SWIRM domain	26	101
PF04438	zf-HIT	domain	HIT zinc finger	18	33
PF04447	DUF550	family	Protein of unknown function (DUF550)	5	118
PF04458	DUF505	family	Protein of unknown function (DUF505)	3	668
PF04474	DUF554	family	Protein of unknown function (DUF554)	8	260
PF04478	Mid2	family	Mid2 like cell wall stress sensor	2	158
PF04485	NblA	family	Phycobilisome degradation protein nblA	7	53
PF04488	Gly_transf_sug	family	Glycosyltransferase sugar-binding region containing DXD motif	31	99
PF04503	SSDP	family	Single-stranded DNA binding protein, SSDP	5	489
PF04508	Pox_A_type_inc	repeat	Viral A-type inclusion protein repeat	27	23
PF04513	Baculo_PEP_C	family	Baculovirus polyhedron envelope protein, PEP, C terminus	11	155
PF04520	DUF584	family	Protein of unknown function, DUF584	15	238
PF04548	AIG1	family	AIG1 family	32	259
PF04553	Tis11B_C	family	Tis11B like protein, C terminus	4	120
PF04564	U-box	domain	U-box domain	17	82
PF04569	DUF591	family	Protein of unknown function	21	109
PF04572	Gb3_synth	family	Alpha 1,4-glycosyltransferase conserved region	10	150
PF04576	DUF593	family	Protein of unknown function, DUF593	16	94
PF04600	DUF571	family	Protein of unknown function (DUF571)	9	524
PF04604	L_biotic_typeA	family	Type-A lantibiotic	9	49
PF04606	Ogr_Delta	family	Phage transcriptional activator, Ogr/Delta	5	73
PF04614	Pex19	family	Pex19 protein family	7	319
PF04644	Motilin_ghrelin	family	Motilin/ghrelin	6	29
PF04647	AgrB	family	Accessory gene regulator B	13	210
PF04654	DUF599	family	Protein of unknown function, DUF599	10	235
PF04657	DUF606	family	Protein of unknown function, DUF606	10	145
PF04667	Endosulfine	family	cAMP-regulated phosphoprotein/endosulfine conserved region	6	123
PF04670	Gtr1_RagA	family	Gtr1/RagA G protein conserved region	11	241
PF04675	DNA_ligase_A_N	family	DNA ligase N terminus	24	213
PF04679	DNA_ligase_A_C	family	ATP dependent DNA ligase C terminal region	50	107
PF04696	Pinin_SDK_memA	family	pinin/SDK/memA/ protein conserved region	2	132
PF04697	Pinin_SDK_N	family	pinin/SDK conserved region	3	137
PF04698	MOBP	domain	Myelin-associated oligodendrocytic basic protein (MOBP)	3	69
PF04702	Vicilin_N	family	Vicilin N terminal region	4	184
PF04704	Zfx_Zfy_act	family	Zfx / Zfy transcription activation region	4	361
PF04706	Dickkopf_N	family	Dickkopf N-terminal cysteine-rich region	8	60
PF04711	ApoA-II	family	Apolipoprotein A-II (ApoA-II)	4	77
PF04732	Filament_head	family	Intermediate filament head (DNA binding) region	34	142
PF04739	AMPKBI	family	5'-AMP-activated protein kinase, beta subunit, complex-interacting region	14	135
PF04740	Transposase_30	family	Bacillus transposase protein	7	254
PF04747	DUF612	family	Protein of unknown function, DUF612	2	517
PF04751	DUF615	family	Protein of unknown function (DUF615)	6	182
PF04774	HABP4_PAI-RBP1	family	Hyaluronan / mRNA binding family	20	142
PF04778	LMP	family	LMP repeated region	6	162
PF04802	DUF625	family	Protein of unknown function (DUF625)	7	210
PF04812	HNF-1B_C	family	Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminus	19	281
PF04814	HNF-1_N	family	Hepatocyte nuclear factor 1 (HNF-1), N terminus	5	183
PF04822	DUF622	family	Protein of unknown function, DUF622	7	92
PF04826	DUF634	family	Protein of unknown function (DUF634)	7	264
PF04837	MbeB_N	family	MbeB-like, N-term conserved region	9	52
PF04847	Calcipressin	family	Calcipressin	9	275
PF04851	ResIII	family	Type III restriction enzyme, res subunit	57	339
PF04863	EGF_alliinase	domain	Alliinase EGF-like domain	6	58
PF04869	Uso1_p115_head	family	Uso1 / p115 like vesicle tethering protein, head region	6	374
PF04871	Uso1_p115_C	family	Uso1 / p115 like vesicle tethering protein, C terminal region	6	153
PF04883	DUF646	family	Bacteriophage protein of unknown function (DUF646)	5	173
PF04893	Yip1	domain	Yip1 domain	21	210
PF04899	MbeD_MobD	family	MbeD/MobD like	6	77
PF04908	SH3BGR	family	SH3-binding, glutamic acid-rich protein	6	104
PF04921	XAP5	family	XAP5 protein	6	274
PF04926	PAP_RNA-bind	domain	Poly(A) polymerase predicted RNA binding domain	15	215
PF04928	PAP_central	domain	Poly(A) polymerase central domain	20	383
PF04930	FUN14	family	FUN14 family	10	132
PF04959	ARS2	family	Arsenite-resistance protein 2	3	227
PF04961	FTCD_C	family	Formiminotransferase-cyclodeaminase	5	219
PF04992	RNA_pol_Rpb1_6	domain	RNA polymerase Rpb1, domain 6	74	205
PF05001	RNA_pol_Rpb1_R	repeat	RNA polymerase Rpb1 C-terminal repeat	99	30
PF05008	V-SNARE	family	Vesicle transport v-SNARE protein	20	175
PF05029	TIMELESS_C	family	Timeless protein C terminal region	5	716
PF05040	HS2ST	family	Heparan sulfate 2-O-sulfotransferase (HS2ST)	4	420
PF05041	Pecanex_C	family	Pecanex protein (C-terminus)	4	238
PF05063	MT-A70	family	MT-A70	11	198
PF05064	Nsp1_C	family	Nsp1-like C-terminal region	8	123
PF05066	RNA_pol_delta	family	DNA-directed RNA polymerase delta subunit	6	197
PF05110	AF-4	family	AF-4 proto-oncoprotein	8	1430
PF05130	FlgN	family	FlgN protein	4	160
PF05142	DUF702	family	Domain of unknown function (DUF702)	8	177
PF05149	Flagellar_rod	family	Paraflagellar rod protein	5	322
PF05175	MTS	domain	Methyltransferase small domain	35	200
PF05181	XPA_C	domain	XPA protein C-terminus	5	53
PF05184	SapB_1	domain	Saposin-like type B, region 1	72	43
PF05186	Dpy-30	motif	Dpy-30 motif	16	43
PF05195	AMP_N	domain	Aminopeptidase P, N-terminal domain	17	169
PF05227	CHASE3	domain	CHASE3 domain	26	145
PF05231	MASE1	domain	MASE1	33	371
PF05235	CHAD	domain	CHAD domain	19	358
PF05240	APOBEC_C	domain	APOBEC-like C-terminal domain	16	70
PF05250	UPF0193	family	Uncharacterised protein family (UPF0193)	2	219
PF05262	Borrelia_P83	family	Borrelia P83/100 protein	4	655
PF05287	PMG	family	PMG protein	5	225
PF05294	Toxin_5	family	Scorpion short toxin	6	34
PF05296	TAS2R	family	Mammalian taste receptor protein (TAS2R)	20	306
PF05300	DUF737	family	Protein of unknown function (DUF737)	2	214
PF05308	DUF729	family	Protein of unknown function (DUF729)	6	271
PF05320	Pox_RNA_Pol_19	family	Poxvirus DNA-directed RNA polymerase 19 kDa subunit	6	177
PF05326	SVA	family	Seminal vesicle autoantigen (SVA)	5	137
PF05335	DUF745	family	Protein of unknown function (DUF745)	9	241
PF05340	DUF740	family	Protein of unknown function (DUF740)	5	773
PF05345	He_PIG	family	Putative Ig domain	108	94
PF05354	Phage_attach	family	Phage Head-Tail Attachment	3	117
PF05362	Lon_C	domain	Lon protease (S16) C-terminal proteolytic domain	27	209
PF05368	NmrA	family	NmrA-like family	26	363
PF05383	La	domain	La domain	36	72
PF05406	WGR	domain	WGR domain	31	92
PF05432	BSP_II	family	Bone sialoprotein II (BSP-II)	4	309
PF05433	Rick_17kDa_Anti	family	Rickettsia 17 kDa surface antigen	87	52
PF05440	MtrB	family	Tetrahydromethanopterin S-methyltransferase subunit B	5	98
PF05456	eIF_4EBP	family	Eukaryotic translation initiation factor 4E binding protein (EIF4EBP)	6	125
PF05462	Dicty_CAR	family	Slime mold cyclic AMP receptor	5	465
PF05463	Sclerostin	family	Sclerostin (SOST)	2	215
PF05466	BASP1	family	Brain acid soluble protein 1 (BASP1 protein)	4	243
PF05485	THAP	domain	THAP domain	51	112
PF05495	zf-CHY	domain	CHY zinc finger	22	96
PF05501	DUF755	family	Domain of unknown function (DUF755)	7	114
PF05506	DUF756	domain	Domain of unknown function (DUF756)	21	114
PF05516	DUF757	family	Domain of Unknown Function (DUF757)	5	142
PF05517	p25-alpha	family	p25-alpha	5	173
PF05522	Metallothionein	family	Metallothionein	7	73
PF05524	PEP-utilisers_N	family	PEP-utilising enzyme, N-terminal	46	128
PF05529	Bap31	family	B-cell receptor-associated protein 31-like	7	238
PF05565	Sipho_Gp157	family	Siphovirus Gp157	10	175
PF05585	Peptidase_A16	family	Tas retrotransposon peptidase A16	2	347
PF05593	RHS_repeat	repeat	RHS Repeat	230	76
PF05597	Phasin	family	Poly(hydroxyalcanoate) granule associated protein (phasin)	8	135
PF05622	HOOK	family	HOOK protein	4	746
PF05624	LISCH7	domain	LISCH7 cysteine rich domain	3	49
PF05649	Peptidase_M13_N	family	Peptidase family M13	26	457
PF05652	DcpS	family	Scavenger mRNA decapping enzyme (DcpS)	3	313
PF05659	RPW8	family	Arabidopsis broad-spectrum mildew resistance protein RPW8	6	158
PF05663	DUF809	family	Protein of unknown function (DUF809)	4	138
PF05667	DUF812	family	Protein of unknown function (DUF812)	4	655
PF05670	DUF814	domain	Domain of unknown function (DUF814)	40	109
PF05672	E-MAP-115	family	E-MAP-115 family	3	193
PF05678	VQ	motif	VQ motif	33	31
PF05682	PHK_AB	family	Phosphorylase kinase alpha/beta	8	1453
PF05701	DUF827	family	Plant protein of unknown function (DUF827)	17	576
PF05726	Pirin_C	domain	Pirin C-terminal region	40	139
PF05729	NACHT	domain	NACHT domain	27	231
PF05739	SNARE	family	SNARE domain	111	67
PF05742	DUF833	family	Protein of unknown function (DUF833)	13	337
PF05743	Tsg101	domain	Tumour susceptibility gene 101 protein (TSG101)	6	443
PF05764	YL1	family	YL1 nuclear protein	9	779
PF05768	DUF836	domain	Glutaredoxin-like domain (DUF836)	49	151
PF05778	Apo-CIII	family	Apolipoprotein CIII (Apo-CIII)	5	92
PF05790	C2-set	domain	Immunoglobulin C2-set domain	27	89
PF05792	Candida_ALS	repeat	Candida agglutinin-like protein (ALS)	3	630
PF05804	KAP	family	Kinesin-associated protein (KAP)	4	869
PF05805	L6_membrane	family	L6 membrane protein	9	233
PF05812	Herpes_BLRF2	family	Herpesvirus BLRF2 protein	12	138
PF05816	TelA	family	Toxic anion resistance protein (TelA)	14	350
PF05833	FbpA	family	Fibronectin-binding protein A N-terminus (FbpA)	21	515
PF05834	Lycopene_cycl	family	Lycopene cyclase protein	20	442
PF05835	Synaphin	family	Synaphin protein	4	144
PF05839	Apc13p	family	Apc13p protein	3	162
PF05856	ARPC4	family	ARP2/3 complex 20 kDa subunit (ARPC4)	6	169
PF05873	Mt_ATP-synt_D	family	ATP synthase D chain, mitochondrial (ATP5H)	5	180
PF05901	Excalibur	domain	Excalibur domain	10	38
PF05911	DUF869	family	Plant protein of unknown function (DUF869)	9	931
PF05957	DUF883	family	Bacterial protein of unknown function (DUF883)	11	99
PF05958	tRNA_U5-meth_tr	family	tRNA (Uracil-5-)-methyltransferase	9	366
PF05960	DUF885	family	Bacterial protein of unknown function (DUF885)	12	600
PF05961	Chordopox_A13L	family	Chordopoxvirus A13L protein	4	70
PF05975	EcsB	family	Bacterial ABC transporter protein EcsB	11	409
PF05992	SbmA_BacA	family	SbmA/BacA-like family	5	136
PF06001	DUF902	family	Domain of Unknown Function (DUF902)	7	61
PF06005	DUF904	family	Protein of unknown function (DUF904)	10	88
PF06008	Laminin_I	family	Laminin Domain I	11	279
PF06009	Laminin_II	family	Laminin Domain II	10	144
PF06010	DUF906	family	Domain of Unknown Function (DUF906)	7	271
PF06012	DUF908	family	Domain of Unknown Function (DUF908)	8	440
PF06013	WXG100	family	Proteins of 100 residues with WXG	27	96
PF06025	DUF913	family	Domain of Unknown Function (DUF913)	9	691
PF06027	DUF914	family	Eukaryotic protein of unknown function (DUF914)	7	398
PF06030	DUF916	family	Bacterial protein of unknown function (DUF916)	7	366
PF06034	DUF919	family	Nucleopolyhedrovirus protein of unknown function (DUF919)	9	66
PF06047	DUF926	family	Domain of Unknown Function (DUF926)	4	119
PF06055	ExoD	family	Exopolysaccharide synthesis, ExoD	12	199
PF06060	Mesothelin	family	Pre-pro-megakaryocyte potentiating factor precursor (Mesothelin)	4	633
PF06102	DUF947	family	Domain of unknown function (DUF947)	8	207
PF06144	DNA_pol3_delta	family	DNA polymerase III, delta subunit	25	363
PF06148	COG2	family	COG (conserved oligomeric Golgi) complex component, COG2	4	806
PF06160	EzrA	family	Septation ring formation regulator, EzrA	10	564
PF06195	DUF996	family	Protein of unknown function (DUF996)	8	168
PF06210	DUF1003	family	Protein of unknown function (DUF1003)	11	132
PF06220	zf-U1	domain	U1 zinc finger	12	38
PF06268	Fascin	domain	Fascin domain	24	135
PF06293	Kdo	family	Lipopolysaccharide kinase (Kdo/WaaP) family	14	226
PF06297	PET	domain	PET Domain	14	112
PF06311	NumbF	family	NUMB phenylalanine-rich region	5	165
PF06327	DUF1053	family	Domain of Unknown Function (DUF1053)	9	127
PF06346	Drf_FH1	family	Formin Homology Region 1	4	181
PF06365	CD34_antigen	family	CD34 antigen protein	4	396
PF06391	MAT1	family	CDK-activating kinase assembly factor MAT1	7	207
PF06393	BID	domain	BH3 interacting domain (BID)	2	197
PF06395	CDC24	domain	CDC24 Calponin	3	90
PF06401	Alpha-2-MRAP_C	domain	Alpha-2-macroglobulin RAP, C-terminal domain	5	248
PF06421	LepA_C	family	GTP-binding protein LepA C-terminus	46	115
PF06428	Sec2p	family	GDP/GTP exchange factor Sec2p	4	136
PF06455	NADH5_C	family	NADH dehydrogenase subunit 5 C-terminus	85	188
PF06456	Arfaptin	domain	Arfaptin-like domain	11	245
PF06462	Hyd_WA	family	Propeller	30	50
PF06464	DMAP_binding	domain	DMAP1-binding Domain	15	121
PF06465	DUF1087	domain	Domain of Unknown Function (DUF1087)	10	121
PF06466	PCAF_N	domain	PCAF (P300/CBP-associated factor) N-terminal domain	4	277
PF06467	zf-MYM	domain	MYM-type Zinc finger	42	45
PF06470	SMC_hinge	domain	SMC proteins Flexible Hinge Domain	98	157
PF06472	ABC_membrane_2	family	ABC transporter transmembrane region 2	26	333
PF06476	DUF1090	family	Protein of unknown function (DUF1090)	8	120
PF06480	FtsH_ext	family	FtsH Extracellular	109	274
PF06484	Ten_N	family	Teneurin Intracellular Region	5	414
PF06513	DUF1103	repeat	Repeat of unknown function (DUF1103)	7	34
PF06518	DUF1104	family	Protein of unknown function (DUF1104)	3	141
PF06519	TolA	family	TolA protein	9	451
PF06540	GMAP	family	Galanin message associated peptide (GMAP)	5	63
PF06546	Vert_HS_TF	family	Vertebrate heat shock transcription factor	6	359
PF06548	Kinesin-related	family	Kinesin-related	7	689
PF06553	BNIP3	family	BNIP3	3	219
PF06583	Neogenin_C	family	Neogenin C-terminus	4	399
PF06595	BDV_P24	family	Borna disease virus P24 protein	2	201
PF06617	M-inducer_phosp	family	M-phase inducer phosphatase	8	306
PF06621	SIM_C	family	Single-minded protein C-terminus	4	337
PF06626	DUF1152	family	Protein of unknown function (DUF1152)	6	309
PF06628	Catalase-rel	family	Catalase-related	24	55
PF06631	DUF1154	family	Protein of unknown function (DUF1154)	4	58
PF06637	PV-1	family	PV-1 protein (PLVAP)	2	442
PF06663	DUF1170	family	Protein of unknown function (DUF1170)	3	228
PF06668	ITI_HC_C	family	Inter-alpha-trypsin inhibitor heavy chain C-terminus	10	192
PF06677	Auto_anti-p27	family	Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)	2	199
PF06681	DUF1182	family	Protein of unknown function (DUF1182)	2	345
PF06682	DUF1183	family	Protein of unknown function (DUF1183)	2	340
PF06687	SUR7	family	SUR7 protein	4	314
PF06689	zf-C4_ClpX	domain	ClpX C4-type zinc finger	30	42
PF06705	SF-assemblin	family	SF-assemblin/beta giardin	6	248
PF06723	MreB_Mbl	family	MreB/Mbl protein	32	341
PF06749	DUF1218	family	Protein of unknown function (DUF1218)	14	124
PF06752	E_Pc_C	family	Enhancer of Polycomb C-terminus	2	242
PF06773	Bim_N	family	Bim protein N-terminus	3	40
PF06779	DUF1228	family	Protein of unknown function (DUF1228)	13	87
PF06780	Erp_C	family	Erp protein C-terminus	11	158
PF06806	DUF1233	family	Putative excisionase (DUF1233)	7	81
PF06810	Phage_GP20	family	Phage minor structural protein GP20	5	162
PF06819	Arc_PepC	domain	Archaeal Peptidase A24 C-terminal Domain	6	115
PF06825	HSBP1	family	Heat shock factor binding protein 1	6	54
PF06827	zf-FPG_IleRS	domain	Zinc finger found in FPG and IleRS	77	32
PF06832	BiPBP_C	family	Penicillin-Binding Protein C-terminus Family	26	95
PF06839	zf-GRF	domain	GRF zinc finger	17	54
PF06874	FBPase_2	family	Firmicute fructose-1,6-bisphosphatase	11	653
PF06892	Phage_CP76	family	Phage regulatory protein CII (CP76)	4	166
PF06906	DUF1272	family	Protein of unknown function (DUF1272)	5	79
PF06920	Ded_cyto	family	Dedicator of cytokinesis	10	195
PF06944	DUF1288	family	Protein of unknown function (DUF1288)	6	139
PF06945	DUF1289	family	Protein of unknown function (DUF1289)	29	56
PF06969	HemN_C	family	HemN C-terminal region	101	175
PF06990	Gal-3-0_sulfotr	family	Galactose-3-O-sulfotransferase	3	431
PF07021	MetW	family	Methionine biosynthesis protein MetW	7	195
PF07028	DUF1319	family	Protein of unknown function (DUF1319)	5	124
PF07050	DUF1333	family	Protein of unknown function (DUF1333)	7	148
PF07052	Hep_59	family	Hepatocellular carcinoma-associated antigen 59	5	117
PF07062	Clc-like	family	Clc-like	7	258
PF07093	SGT1	family	SGT1 protein	6	727
PF07106	TBPIP	family	Tat binding protein 1(TBP-1)-interacting protein (TBPIP)	4	205
PF07127	Nodulin_late	family	Late nodulin protein	12	69
PF07133	Merozoite_SPAM	family	Merozoite surface protein (SPAM)	4	377
PF07137	VDE	family	Violaxanthin de-epoxidase (VDE)	3	354
PF07142	DUF1388	repeat	Repeat of unknown function (DUF1388)	15	29
PF07165	DUF1397	family	Protein of unknown function (DUF1397)	5	230
PF07172	GRP	family	Glycine rich protein family	15	145
PF07195	FliD_C	family	Flagellar hook-associated protein 2 C-terminus	37	457
PF07200	Mod_r	domain	Modifier of rudimentary (Mod(r)) protein	10	151
PF07221	GlcNAc_2-epim	family	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)	20	470
PF07223	DUF1421	family	Protein of unknown function (DUF1421)	3	414
PF07246	Phlebovirus_NSM	family	Phlebovirus nonstructural protein NS-M	3	298
PF07248	DUF1431	family	Protein of unknown function (DUF1431)	11	158
PF07271	Cytadhesin_P30	family	Cytadhesin P30/P32	3	312
PF07300	DUF1452	family	Protein of unknown function (DUF1452)	8	117
PF07321	YscO	family	Type III secretion protein YscO	3	153
PF07332	DUF1469	domain	Protein of unknown function (DUF1469)	5	133
PF07344	Amastin	family	Amastin surface glycoprotein	4	187
PF07361	Cytochrom_B562	family	Cytochrome b562	8	108
PF07373	CAMP_factor	family	CAMP factor (Cfa)	3	228
PF07376	Prosystemin	family	Prosystemin	2	198
PF07449	HyaE	family	Hydrogenase-1 expression protein HyaE	9	114
PF07450	HycH	family	Formate hydrogenlyase maturation protein HycH	3	132
PF07464	ApoLp-III	family	Apolipophorin-III precursor (apoLp-III)	5	189
PF07495	Y_Y_Y	domain	Two component regulator three Y motif	82	60
PF07496	zf-CW	domain	CW-type Zinc Finger	23	60
PF07509	DUF1523	family	Protein of unknown function (DUF1523)	4	178
PF07511	DUF1525	family	Protein of unknown function (DUF1525)	5	119
PF07521	RMMBL	motif	RNA-metabolising metallo-beta-lactamase	95	47
PF07525	SOCS_box	domain	SOCS box	65	46
PF07528	DZF	domain	DZF	6	262
PF07529	HSA	domain	HSA	14	73
PF07546	EMI	domain	EMI domain	25	99
PF07558	Shugoshin_N	domain	Shugoshin N terminus	5	57
PF07562	NCD3G	family	Nine Cysteines Domain of family 3 GPCR	38	38
PF07563	DUF1541	family	Protein of unknown function (DUF1541)	8	54
PF07583	PSCyt2	family	Protein of unknown function (DUF1549)	40	265
PF07644	PGAMP	family	Planctomycete PGAMP	4	35
PF07645	EGF_CA	domain	Calcium binding EGF domain	19	57
PF07646	Kelch_2	repeat	Kelch motif	47	70
PF07647	SAM_2	domain	SAM domain (Sterile alpha motif)	49	79
PF07648	Kazal_2	domain	Kazal-type serine protease inhibitor domain	71	95
PF07649	C1_3	domain	C1-like domain	196	41
PF07650	KH_2	domain	KH domain	169	90
PF07653	SH3_2	domain	Variant SH3 domain	39	153
PF07654	C1-set	domain	Immunoglobulin C1-set domain	129	105
PF07677	A2M_recep	domain	A-macroglobulin receptor	54	99
PF07678	A2M_comp	domain	A-macroglobulin complement component	58	348
PF07679	I-set	domain	Immunoglobulin I-set domain	58	114
PF07686	V-set	domain	Immunoglobulin V-set domain	121	200
PF07690	MFS_1	family	Major Facilitator Superfamily	208	729
PF07695	7TMR-DISM_7TM	domain	7TM diverse intracellular signalling	32	241
PF07699	GCC2_GCC3	family	GCC2 and GCC3	51	76
PF07703	A2M_N_2	family	Alpha-2-macroglobulin family N-terminal region	74	240
PF07707	BACK	domain	BTB And C-terminal Kelch	88	108
PF07710	P53_tetramer	motif	P53 tetramerisation motif	9	46
PF07714	Pkinase_Tyr	domain	Protein tyrosine kinase	155	534
PF07716	bZIP_2	family	Basic region leucine zipper	51	58
PF07719	TPR_2	repeat	Tetratricopeptide repeat	388	35
PF07724	AAA_2	domain	ATPase family associated with various cellular activities (AAA)	146	257
PF07726	AAA_3	family	ATPase family associated with various cellular activities (AAA)	55	138
PF07728	AAA_5	domain	ATPase family associated with various cellular activities (AAA)	41	381
PF07730	HisKA_3	domain	Histidine kinase	194	86
PF07731	Cu-oxidase_2	domain	Multicopper oxidase	136	225
PF07732	Cu-oxidase_3	domain	Multicopper oxidase	132	131
PF07738	Sad1_UNC	family	Sad1 / UNC-like C-terminal	28	159
PF07741	BRF1	family	Brf1-like TBP-binding domain	16	155
PF07744	SPOC	domain	SPOC domain	20	146
PF07754	DUF1610	domain	Domain of unknown function (DUF1610)	21	24
PF07812	TfuA	family	TfuA-like protein	8	120
PF07813	LTXXQ	motif	LTXXQ motif	48	23
PF07831	PYNP_C	domain	Pyrimidine nucleoside phosphorylase C-terminal domain	54	75
PF07834	RanGAP1_C	domain	RanGAP1 C-terminal domain	3	185
PF07837	FTCD_N	domain	Formiminotransferase domain, N-terminal subdomain	17	202
PF07843	DUF1634	family	Protein of unknown function (DUF1634)	14	118
PF07859	Abhydrolase_3	domain	alpha/beta hydrolase fold	134	355
PF07885	Ion_trans_2	domain	Ion channel	135	110
PF07888	CoCoA	family	Coiled-coil transcriptional coactivator-like protein	3	617
PF07926	TPR_MLP1_2	family	TPR/MLP1/MLP2-like protein	9	276
PF07965	Integrin_B_tail	domain	Integrin beta tail domain	35	102
PF07966	A1_Propeptide	motif	A1 Propeptide	86	29
PF07974	EGF_2	domain	EGF-like domain	55	51
PF07975	C1_4	domain	TFIIH C1-like domain	16	63
PF07983	X8	domain	X8 domain	107	131
PF07985	SRR1	domain	SRR1	13	56
PF07986	TBCC	domain	Tubulin binding cofactor C	10	120
PF07989	Spindle_assoc	domain	Spindle associated	7	63
PF07992	Pyr_redox_2	domain	Pyridine nucleotide-disulphide oxidoreductase	152	556
PF07993	NAD_binding_4	family	Male sterility protein	109	423
PF08005	PHR	domain	PHR domain	11	168
PF08016	PKD_channel	family	Polycystin cation channel	13	462
PF08021	FAD_binding_9	domain	Siderophore-interacting FAD-binding domain	40	146
PF08028	Acyl-CoA_dh_2	domain	Acyl-CoA dehydrogenase, C-terminal domain	38	148
PF08035	Op_neuropeptide	family	Opioids neuropeptide	11	32
PF08043	Actin_bind_SAA	repeat	Actin Binding Sixteen Amino Acid Repeat	60	16
PF08063	PADR1	domain	PADR1 (NUC008) domain	12	57
PF08064	UME	domain	UME (NUC010) domain	11	114
PF08065	K167R	repeat	K167R (NUC007) repeat	24	113
PF08068	DKCLD	domain	DKCLD (NUC011) domain	18	61
PF08070	DTHCT	family	DTHCT (NUC029) region	7	107
PF08071	RS4NT	domain	RS4NT (NUC023) domain	17	39
PF08080	zf-RNPHF	domain	RNPHF zinc finger	3	36
PF08127	Propeptide_C1	motif	Propeptide_C1	57	46
PF08172	CASP_C	family	CASP C terminal	11	262
PF08178	GnsAB	family	GnsA/GnsB family	4	57
PF08190	Nop17p	family	Nop17p (pre-rRNA processing)	16	344