| ID | Name |
Type | Description | # Aligned Sequences | Aignment length in AA |
|---|
| PF00002 |
7tm_2 |
family | 7 transmembrane receptor (Secretin family) | 33 | 376 |
| PF00003 |
7tm_3 |
family | 7 transmembrane receptor (metabotropic glutamate family) | 30 | 292 |
| PF00004 |
AAA |
family | ATPase family associated with various cellular activities (AAA) | 245 | 410 |
| PF00005 |
ABC_tran |
domain | ABC transporter | 65 | 333 |
| PF00007 |
Cys_knot |
domain | Cystine-knot domain | 24 | 112 |
| PF00008 |
EGF |
domain | EGF-like domain | 73 | 51 |
| PF00009 |
GTP_EFTU |
domain | Elongation factor Tu GTP binding domain | 222 | 430 |
| PF00010 |
HLH |
domain | Helix-loop-helix DNA-binding domain | 177 | 93 |
| PF00013 |
KH_1 |
domain | KH domain | 433 | 93 |
| PF00014 |
Kunitz_BPTI |
domain | Kunitz/Bovine pancreatic trypsin inhibitor domain | 153 | 80 |
| PF00017 |
SH2 |
domain | SH2 domain | 58 | 109 |
| PF00020 |
TNFR_c6 |
domain | TNFR/NGFR cysteine-rich region | 37 | 50 |
| PF00021 |
UPAR_LY6 |
domain | u-PAR/Ly-6 domain | 42 | 109 |
| PF00023 |
Ank |
repeat | Ankyrin repeat | 1179 | 59 |
| PF00028 |
Cadherin |
family | Cadherin domain | 57 | 129 |
| PF00029 |
Connexin |
family | Connexin | 16 | 259 |
| PF00031 |
Cystatin |
domain | Cystatin domain | 49 | 109 |
| PF00035 |
dsrm |
domain | Double-stranded RNA binding motif | 85 | 77 |
| PF00036 |
efhand |
domain | EF hand | 937 | 29 |
| PF00037 |
Fer4 |
domain | 4Fe-4S binding domain | 533 | 24 |
| PF00038 |
Filament |
family | Intermediate filament protein | 36 | 377 |
| PF00039 |
fn1 |
domain | Fibronectin type I domain | 20 | 42 |
| PF00041 |
fn3 |
domain | Fibronectin type III domain | 108 | 120 |
| PF00043 |
GST_C |
domain | Glutathione S-transferase, C-terminal domain | 61 | 157 |
| PF00045 |
Hemopexin |
repeat | Hemopexin | 76 | 58 |
| PF00046 |
Homeobox |
domain | Homeobox domain | 189 | 71 |
| PF00047 |
ig |
domain | Immunoglobulin domain | 89 | 93 |
| PF00048 |
IL8 |
domain | Small cytokines (intecrine/chemokine), interleukin-8 like | 107 | 75 |
| PF00049 |
Insulin |
domain | Insulin/IGF/Relaxin family | 28 | 176 |
| PF00051 |
Kringle |
domain | Kringle domain | 24 | 85 |
| PF00053 |
Laminin_EGF |
family | Laminin EGF-like (Domains III and V) | 72 | 72 |
| PF00055 |
Laminin_N |
family | Laminin N-terminal (Domain VI) | 9 | 264 |
| PF00056 |
Ldh_1_N |
family | lactate/malate dehydrogenase, NAD binding domain | 30 | 175 |
| PF00057 |
Ldl_recept_a |
repeat | Low-density lipoprotein receptor domain class A | 53 | 62 |
| PF00058 |
Ldl_recept_b |
repeat | Low-density lipoprotein receptor repeat class B | 28 | 57 |
| PF00059 |
Lectin_C |
domain | Lectin C-type domain | 44 | 136 |
| PF00061 |
Lipocalin |
domain | Lipocalin / cytosolic fatty-acid binding protein family | 157 | 186 |
| PF00069 |
Pkinase |
domain | Protein kinase domain | 54 | 473 |
| PF00074 |
RnaseA |
domain | Pancreatic ribonuclease | 30 | 142 |
| PF00076 |
RRM_1 |
domain | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 79 | 80 |
| PF00079 |
Serpin |
domain | Serpin (serine protease inhibitor) | 42 | 423 |
| PF00082 |
Peptidase_S8 |
domain | Subtilase family | 45 | 764 |
| PF00083 |
Sugar_tr |
family | Sugar (and other) transporter | 49 | 617 |
| PF00085 |
Thioredoxin |
domain | Thioredoxin | 51 | 122 |
| PF00089 |
Trypsin |
domain | Trypsin | 76 | 355 |
| PF00090 |
TSP_1 |
family | Thrombospondin type 1 domain | 31 | 62 |
| PF00092 |
VWA |
domain | von Willebrand factor type A domain | 195 | 296 |
| PF00093 |
VWC |
family | von Willebrand factor type C domain | 20 | 99 |
| PF00094 |
VWD |
family | von Willebrand factor type D domain | 69 | 215 |
| PF00097 |
zf-C3HC4 |
domain | Zinc finger, C3HC4 type (RING finger) | 65 | 74 |
| PF00100 |
Zona_pellucida |
family | Zona pellucida-like domain | 84 | 403 |
| PF00102 |
Y_phosphatase |
domain | Protein-tyrosine phosphatase | 123 | 451 |
| PF00104 |
Hormone_recep |
family | Ligand-binding domain of nuclear hormone receptor | 187 | 336 |
| PF00110 |
wnt |
family | wnt family | 15 | 394 |
| PF00112 |
Peptidase_C1 |
domain | Papain family cysteine protease | 162 | 367 |
| PF00117 |
GATase |
domain | Glutamine amidotransferase class-I | 137 | 292 |
| PF00123 |
Hormone_2 |
family | Peptide hormone | 26 | 28 |
| PF00125 |
Histone |
domain | Core histone H2A/H2B/H3/H4 | 70 | 85 |
| PF00129 |
MHC_I |
domain | Class I Histocompatibility antigen, domains alpha 1 and 2 | 25 | 181 |
| PF00134 |
Cyclin_N |
domain | Cyclin, N-terminal domain | 150 | 194 |
| PF00135 |
COesterase |
domain | Carboxylesterase | 129 | 889 |
| PF00143 |
Interferon |
domain | Interferon alpha/beta domain | 17 | 193 |
| PF00147 |
Fibrinogen_C |
domain | Fibrinogen beta and gamma chains, C-terminal globular domain | 11 | 272 |
| PF00149 |
Metallophos |
domain | Calcineurin-like phosphoesterase | 339 | 556 |
| PF00157 |
Pou |
domain | Pou domain - N-terminal to homeobox domain | 10 | 78 |
| PF00168 |
C2 |
domain | C2 domain | 409 | 188 |
| PF00169 |
PH |
domain | PH domain | 149 | 333 |
| PF00173 |
Cyt-b5 |
domain | Cytochrome b5-like Heme/Steroid binding domain | 234 | 176 |
| PF00178 |
Ets |
domain | Ets-domain | 15 | 92 |
| PF00179 |
UQ_con |
domain | Ubiquitin-conjugating enzyme | 75 | 239 |
| PF00181 |
Ribosomal_L2 |
domain | Ribosomal Proteins L2, RNA binding domain | 62 | 94 |
| PF00191 |
Annexin |
family | Annexin | 181 | 81 |
| PF00194 |
Carb_anhydrase |
domain | Eukaryotic-type carbonic anhydrase | 14 | 286 |
| PF00200 |
Disintegrin |
domain | Disintegrin | 89 | 111 |
| PF00204 |
DNA_gyraseB |
domain | DNA gyrase B | 65 | 235 |
| PF00209 |
SNF |
family | Sodium:neurotransmitter symporter family | 15 | 642 |
| PF00211 |
Guanylate_cyc |
domain | Adenylate and Guanylate cyclase catalytic domain | 21 | 248 |
| PF00212 |
ANP |
family | Atrial natriuretic peptide | 14 | 105 |
| PF00226 |
DnaJ |
domain | DnaJ domain | 272 | 103 |
| PF00227 |
Proteasome |
domain | Proteasome A-type and B-type | 185 | 269 |
| PF00229 |
TNF |
domain | TNF(Tumour Necrosis Factor) family | 52 | 171 |
| PF00240 |
ubiquitin |
domain | Ubiquitin family | 93 | 89 |
| PF00245 |
Alk_phosphatase |
domain | Alkaline phosphatase | 18 | 611 |
| PF00246 |
Peptidase_M14 |
domain | Zinc carboxypeptidase | 139 | 656 |
| PF00248 |
Aldo_ket_red |
domain | Aldo/keto reductase family | 67 | 402 |
| PF00249 |
Myb_DNA-binding |
domain | Myb-like DNA-binding domain | 205 | 100 |
| PF00254 |
FKBP_C |
domain | FKBP-type peptidyl-prolyl cis-trans isomerase | 184 | 253 |
| PF00261 |
Tropomyosin |
family | Tropomyosin | 8 | 237 |
| PF00270 |
DEAD |
domain | DEAD/DEAH box helicase | 201 | 548 |
| PF00271 |
Helicase_C |
family | Helicase conserved C-terminal domain | 506 | 169 |
| PF00292 |
PAX |
domain | 'Paired box' domain | 6 | 126 |
| PF00293 |
NUDIX |
domain | NUDIX domain | 205 | 314 |
| PF00307 |
CH |
domain | Calponin homology (CH) domain | 203 | 151 |
| PF00320 |
GATA |
domain | GATA zinc finger | 76 | 45 |
| PF00324 |
AA_permease |
family | Amino acid permease | 28 | 621 |
| PF00326 |
Peptidase_S9 |
family | Prolyl oligopeptidase family | 72 | 280 |
| PF00328 |
Acid_phosphat_A |
family | Histidine acid phosphatase | 104 | 944 |
| PF00335 |
Tetraspannin |
family | Tetraspanin family | 69 | 362 |
| PF00337 |
Gal-bind_lectin |
domain | Galactoside-binding lectin | 87 | 275 |
| PF00357 |
Integrin_alpha |
family | Integrin alpha cytoplasmic region | 27 | 15 |
| PF00362 |
Integrin_beta |
family | Integrin, beta chain | 17 | 444 |
| PF00363 |
Casein |
family | Casein | 15 | 97 |
| PF00373 |
Band_41 |
domain | FERM domain (Band 4.1 family) | 8 | 210 |
| PF00378 |
ECH |
family | Enoyl-CoA hydratase/isomerase family | 13 | 176 |
| PF00385 |
Chromo |
family | 'chromo' (CHRromatin Organisation MOdifier) domain | 188 | 89 |
| PF00386 |
C1q |
domain | C1q domain | 51 | 161 |
| PF00389 |
2-Hacid_dh |
domain | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain | 186 | 105 |
| PF00396 |
Granulin |
family | Granulin | 15 | 43 |
| PF00397 |
WW |
domain | WW domain | 78 | 31 |
| PF00400 |
WD40 |
repeat | WD domain, G-beta repeat | 1923 | 64 |
| PF00403 |
HMA |
domain | Heavy-metal-associated domain | 128 | 73 |
| PF00431 |
CUB |
domain | CUB domain | 32 | 158 |
| PF00433 |
Pkinase_C |
family | Protein kinase C terminal domain | 176 | 118 |
| PF00439 |
Bromodomain |
domain | Bromodomain | 67 | 94 |
| PF00443 |
UCH |
family | Ubiquitin carboxyl-terminal hydrolase | 62 | 1766 |
| PF00450 |
Peptidase_S10 |
domain | Serine carboxypeptidase | 86 | 684 |
| PF00452 |
Bcl-2 |
family | Apoptosis regulator proteins, Bcl-2 family | 14 | 112 |
| PF00454 |
PI3_PI4_kinase |
family | Phosphatidylinositol 3- and 4-kinase | 46 | 483 |
| PF00458 |
WHEP-TRS |
family | WHEP-TRS domain | 14 | 57 |
| PF00467 |
KOW |
family | KOW motif | 241 | 44 |
| PF00489 |
IL6 |
domain | Interleukin-6/G-CSF/MGF family | 10 | 158 |
| PF00498 |
FHA |
family | FHA domain | 230 | 219 |
| PF00505 |
HMG_box |
domain | HMG (high mobility group) box | 30 | 71 |
| PF00514 |
Arm |
repeat | Armadillo/beta-catenin-like repeat | 248 | 54 |
| PF00515 |
TPR_1 |
repeat | Tetratricopeptide repeat | 569 | 34 |
| PF00520 |
Ion_trans |
family | Ion transport protein | 327 | 424 |
| PF00531 |
Death |
domain | Death domain | 92 | 98 |
| PF00533 |
BRCT |
family | BRCA1 C Terminus (BRCT) domain | 116 | 148 |
| PF00536 |
SAM_1 |
domain | SAM domain (Sterile alpha motif) | 74 | 72 |
| PF00554 |
RHD |
domain | Rel homology domain (RHD) | 21 | 221 |
| PF00560 |
LRR_1 |
repeat | Leucine Rich Repeat | 2562 | 46 |
| PF00564 |
PB1 |
domain | PB1 domain | 64 | 112 |
| PF00568 |
WH1 |
domain | WH1 domain | 8 | 118 |
| PF00569 |
ZZ |
domain | Zinc finger, ZZ type | 10 | 46 |
| PF00570 |
HRDC |
domain | HRDC domain | 29 | 83 |
| PF00574 |
CLP_protease |
domain | Clp protease | 88 | 209 |
| PF00578 |
AhpC-TSA |
domain | AhpC/TSA family | 27 | 189 |
| PF00583 |
Acetyltransf_1 |
family | Acetyltransferase (GNAT) family | 244 | 150 |
| PF00594 |
Gla |
domain | Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain | 29 | 42 |
| PF00595 |
PDZ |
domain | PDZ domain (Also known as DHR or GLGF) | 61 | 114 |
| PF00596 |
Aldolase_II |
domain | Class II Aldolase and Adducin N-terminal domain | 56 | 273 |
| PF00611 |
FCH |
family | Fes/CIP4 homology domain | 33 | 116 |
| PF00612 |
IQ |
motif | IQ calmodulin-binding motif | 356 | 21 |
| PF00613 |
PI3Ka |
family | Phosphoinositide 3-kinase family, accessory domain (PIK domain) | 16 | 271 |
| PF00617 |
RasGEF |
family | RasGEF domain | 12 | 248 |
| PF00618 |
RasGEF_N |
family | Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif | 12 | 66 |
| PF00619 |
CARD |
domain | Caspase recruitment domain | 61 | 102 |
| PF00620 |
RhoGAP |
domain | RhoGAP domain | 95 | 238 |
| PF00622 |
SPRY |
family | SPRY domain | 77 | 240 |
| PF00627 |
UBA |
domain | UBA/TS-N domain | 161 | 45 |
| PF00628 |
PHD |
domain | PHD-finger | 104 | 94 |
| PF00629 |
MAM |
domain | MAM domain | 46 | 233 |
| PF00632 |
HECT |
domain | HECT-domain (ubiquitin-transferase) | 75 | 576 |
| PF00633 |
HHH |
motif | Helix-hairpin-helix motif | 108 | 30 |
| PF00640 |
PID |
domain | Phosphotyrosine interaction domain (PTB/PID) | 26 | 187 |
| PF00642 |
zf-CCCH |
family | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 96 | 29 |
| PF00643 |
zf-B_box |
domain | B-box zinc finger | 59 | 55 |
| PF00644 |
PARP |
family | Poly(ADP-ribose) polymerase catalytic domain | 38 | 294 |
| PF00645 |
zf-PARP |
domain | Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region | 14 | 94 |
| PF00646 |
F-box |
domain | F-box domain | 576 | 94 |
| PF00651 |
BTB |
domain | BTB/POZ domain | 102 | 168 |
| PF00652 |
Ricin_B_lectin |
domain | Ricin-type beta-trefoil lectin domain | 99 | 200 |
| PF00653 |
BIR |
domain | Inhibitor of Apoptosis domain | 42 | 113 |
| PF00656 |
Peptidase_C14 |
domain | Caspase domain | 121 | 671 |
| PF00659 |
POLO_box |
family | POLO box duplicated region | 13 | 77 |
| PF00664 |
ABC_membrane |
family | ABC transporter transmembrane region | 72 | 378 |
| PF00685 |
Sulfotransfer_1 |
domain | Sulfotransferase domain | 57 | 445 |
| PF00688 |
TGFb_propeptide |
family | TGF-beta propeptide | 31 | 343 |
| PF00702 |
Hydrolase |
domain | haloacid dehalogenase-like hydrolase | 247 | 487 |
| PF00703 |
Glyco_hydro_2 |
domain | Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain | 12 | 146 |
| PF00704 |
Glyco_hydro_18 |
domain | Glycosyl hydrolases family 18 | 171 | 696 |
| PF00709 |
Adenylsucc_synt |
domain | Adenylosuccinate synthetase | 11 | 444 |
| PF00733 |
Asn_synthase |
domain | Asparagine synthase | 105 | 490 |
| PF00735 |
GTP_CDC |
family | Cell division protein | 16 | 319 |
| PF00753 |
Lactamase_B |
domain | Metallo-beta-lactamase superfamily | 329 | 344 |
| PF00754 |
F5_F8_type_C |
domain | F5/8 type C domain | 188 | 220 |
| PF00755 |
Carn_acyltransf |
family | Choline/Carnitine o-acyltransferase | 22 | 867 |
| PF00758 |
EPO_TPO |
domain | Erythropoietin/thrombopoietin | 7 | 185 |
| PF00762 |
Ferrochelatase |
domain | Ferrochelatase | 21 | 356 |
| PF00763 |
THF_DHG_CYH |
family | Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain | 27 | 121 |
| PF00777 |
Glyco_transf_29 |
family | Glycosyltransferase family 29 (sialyltransferase) | 5 | 328 |
| PF00780 |
CNH |
family | CNH domain | 23 | 389 |
| PF00781 |
DAGK_cat |
family | Diacylglycerol kinase catalytic domain (presumed) | 133 | 291 |
| PF00782 |
DSPc |
domain | Dual specificity phosphatase, catalytic domain | 27 | 234 |
| PF00786 |
PBD |
domain | P21-Rho-binding domain | 52 | 84 |
| PF00787 |
PX |
domain | PX domain | 76 | 315 |
| PF00788 |
RA |
domain | Ras association (RalGDS/AF-6) domain | 59 | 135 |
| PF00789 |
UBX |
domain | UBX domain | 24 | 153 |
| PF00790 |
VHS |
family | VHS domain | 16 | 157 |
| PF00795 |
CN_hydrolase |
family | Carbon-nitrogen hydrolase | 48 | 267 |
| PF00804 |
Syntaxin |
domain | Syntaxin | 61 | 118 |
| PF00812 |
Ephrin |
family | Ephrin | 14 | 176 |
| PF00822 |
PMP22_Claudin |
family | PMP-22/EMP/MP20/Claudin family | 13 | 198 |
| PF00829 |
Ribosomal_L21p |
family | Ribosomal prokaryotic L21 protein | 69 | 102 |
| PF00835 |
SNAP-25 |
family | SNAP-25 family | 13 | 75 |
| PF00855 |
PWWP |
domain | PWWP domain | 15 | 101 |
| PF00856 |
SET |
family | SET domain | 108 | 772 |
| PF00860 |
Xan_ur_permease |
family | Permease family | 21 | 449 |
| PF00865 |
Osteopontin |
family | Osteopontin | 7 | 355 |
| PF00867 |
XPG_I |
family | XPG I-region | 16 | 120 |
| PF00875 |
DNA_photolyase |
domain | DNA photolyase | 25 | 215 |
| PF00878 |
CIMR |
family | Cation-independent mannose-6-phosphate receptor repeat | 12 | 163 |
| PF00880 |
Nebulin |
repeat | Nebulin repeat | 137 | 29 |
| PF00907 |
T-box |
domain | T-box | 22 | 203 |
| PF00917 |
MATH |
domain | MATH domain | 70 | 196 |
| PF00930 |
DPPIV_N |
family | Dipeptidyl peptidase IV (DPP IV) N-terminal region | 46 | 812 |
| PF00941 |
FAD_binding_5 |
family | FAD binding domain in molybdopterin dehydrogenase | 98 | 253 |
| PF00953 |
Glycos_transf_4 |
family | Glycosyl transferase | 24 | 267 |
| PF00957 |
Synaptobrevin |
family | Synaptobrevin | 41 | 89 |
| PF00965 |
TIMP |
family | Tissue inhibitor of metalloproteinase | 6 | 186 |
| PF00969 |
MHC_II_beta |
domain | Class II histocompatibility antigen, beta domain | 121 | 84 |
| PF00992 |
Troponin |
family | Troponin | 21 | 147 |
| PF01008 |
IF-2B |
family | Initiation factor 2 subunit family | 17 | 567 |
| PF01023 |
S_100 |
domain | S-100/ICaBP type calcium binding domain | 27 | 44 |
| PF01028 |
Topoisom_I |
domain | Eukaryotic DNA topoisomerase I, catalytic core | 31 | 294 |
| PF01033 |
Somatomedin_B |
family | Somatomedin B domain | 21 | 53 |
| PF01042 |
Ribonuc_L-PSP |
domain | Endoribonuclease L-PSP | 31 | 159 |
| PF01044 |
Vinculin |
family | Vinculin family | 10 | 1289 |
| PF01049 |
Cadherin_C |
family | Cadherin cytoplasmic region | 20 | 169 |
| PF01055 |
Glyco_hydro_31 |
family | Glycosyl hydrolases family 31 | 113 | 1078 |
| PF01067 |
Calpain_III |
domain | Calpain large subunit, domain III | 14 | 169 |
| PF01074 |
Glyco_hydro_38 |
domain | Glycosyl hydrolases family 38 N-terminal domain | 52 | 403 |
| PF01079 |
Hint |
family | Hint module | 18 | 285 |
| PF01093 |
Clusterin |
family | Clusterin | 5 | 457 |
| PF01103 |
Bac_surface_Ag |
family | Surface antigen | 74 | 661 |
| PF01105 |
EMP24_GP25L |
domain | emp24/gp25L/p24 family | 83 | 181 |
| PF01108 |
Tissue_fac |
family | Tissue factor | 4 | 301 |
| PF01111 |
CKS |
domain | Cyclin-dependent kinase regulatory subunit | 7 | 82 |
| PF01119 |
DNA_mis_repair |
family | DNA mismatch repair protein, C-terminal domain | 28 | 193 |
| PF01122 |
Cobalamin_bind |
family | Eukaryotic cobalamin-binding protein | 5 | 451 |
| PF01127 |
Sdh_cyt |
family | Succinate dehydrogenase cytochrome b subunit | 42 | 128 |
| PF01129 |
ART |
family | NAD:arginine ADP-ribosyltransferase | 8 | 346 |
| PF01145 |
Band_7 |
family | SPFH domain / Band 7 family | 79 | 284 |
| PF01146 |
Caveolin |
family | Caveolin | 5 | 177 |
| PF01150 |
GDA1_CD39 |
family | GDA1/CD39 (nucleoside phosphatase) family | 9 | 560 |
| PF01153 |
Glypican |
family | Glypican | 7 | 626 |
| PF01169 |
UPF0016 |
family | Uncharacterized protein family UPF0016 | 11 | 76 |
| PF01170 |
UPF0020 |
domain | Putative RNA methylase family UPF0020 | 18 | 227 |
| PF01193 |
RNA_pol_L |
domain | RNA polymerase Rpb3/Rpb11 dimerisation domain | 140 | 379 |
| PF01208 |
URO-D |
domain | Uroporphyrinogen decarboxylase (URO-D) | 15 | 390 |
| PF01217 |
Clat_adaptor_s |
family | Clathrin adaptor complex small chain | 7 | 165 |
| PF01229 |
Glyco_hydro_39 |
family | Glycosyl hydrolases family 39 | 4 | 547 |
| PF01234 |
NNMT_PNMT_TEMT |
family | NNMT/PNMT/TEMT family | 7 | 289 |
| PF01253 |
SUI1 |
domain | Translation initiation factor SUI1 | 26 | 85 |
| PF01262 |
AlaDh_PNT_C |
domain | Alanine dehydrogenase/PNT, C-terminal domain | 102 | 233 |
| PF01266 |
DAO |
domain | FAD dependent oxidoreductase | 545 | 1815 |
| PF01273 |
LBP_BPI_CETP |
family | LBP / BPI / CETP family, N-terminal domain | 40 | 238 |
| PF01275 |
Myelin_PLP |
family | Myelin proteolipid protein (PLP or lipophilin) | 7 | 288 |
| PF01284 |
MARVEL |
domain | Membrane-associating domain | 43 | 229 |
| PF01299 |
Lamp |
family | Lysosome-associated membrane glycoprotein (Lamp) | 10 | 396 |
| PF01302 |
CAP_GLY |
domain | CAP-Gly domain | 43 | 92 |
| PF01335 |
DED |
domain | Death effector domain | 40 | 95 |
| PF01336 |
tRNA_anti |
domain | OB-fold nucleic acid binding domain | 649 | 191 |
| PF01344 |
Kelch_1 |
repeat | Kelch motif | 230 | 70 |
| PF01352 |
KRAB |
family | KRAB box | 77 | 41 |
| PF01354 |
Antifreeze |
pfam entry | Antifreeze-like domain | 22 | 61 |
| PF01363 |
FYVE |
domain | FYVE zinc finger | 23 | 102 |
| PF01365 |
RYDR_ITPR |
family | RIH domain | 18 | 250 |
| PF01370 |
Epimerase |
family | NAD dependent epimerase/dehydratase family | 106 | 413 |
| PF01388 |
ARID |
domain | ARID/BRIGHT DNA binding domain | 12 | 118 |
| PF01390 |
SEA |
family | SEA domain | 21 | 136 |
| PF01392 |
Fz |
family | Fz domain | 32 | 160 |
| PF01393 |
Chromo_shadow |
domain | Chromo shadow domain | 11 | 63 |
| PF01399 |
PCI |
family | PCI domain | 90 | 242 |
| PF01401 |
Peptidase_M2 |
family | Angiotensin-converting enzyme | 6 | 600 |
| PF01403 |
Sema |
family | Sema domain | 27 | 549 |
| PF01404 |
Ephrin_lbd |
domain | Ephrin receptor ligand binding domain | 15 | 199 |
| PF01414 |
DSL |
domain | Delta serrate ligand | 18 | 67 |
| PF01421 |
Reprolysin |
domain | Reprolysin (M12B) family zinc metalloprotease | 39 | 215 |
| PF01423 |
LSM |
domain | LSM domain | 132 | 116 |
| PF01429 |
MBD |
domain | Methyl-CpG binding domain | 18 | 152 |
| PF01433 |
Peptidase_M1 |
family | Peptidase family M1 | 38 | 486 |
| PF01434 |
Peptidase_M41 |
family | Peptidase family M41 | 31 | 219 |
| PF01437 |
PSI |
family | Plexin repeat | 98 | 127 |
| PF01442 |
Apolipoprotein |
domain | Apolipoprotein A1/A4/E family | 21 | 284 |
| PF01454 |
MAGE |
family | MAGE family | 14 | 307 |
| PF01459 |
Porin_3 |
family | Eukaryotic porin | 22 | 356 |
| PF01462 |
LRRNT |
family | Leucine rich repeat N-terminal domain | 26 | 37 |
| PF01463 |
LRRCT |
family | Leucine rich repeat C-terminal domain | 61 | 30 |
| PF01465 |
GRIP |
family | GRIP domain | 8 | 50 |
| PF01477 |
PLAT |
domain | PLAT/LH2 domain | 75 | 159 |
| PF01485 |
IBR |
family | IBR domain | 30 | 116 |
| PF01496 |
V_ATPase_I |
family | V-type ATPase 116kDa subunit family | 17 | 958 |
| PF01501 |
Glyco_transf_8 |
family | Glycosyl transferase family 8 | 70 | 436 |
| PF01504 |
PIP5K |
family | Phosphatidylinositol-4-phosphate 5-Kinase | 16 | 436 |
| PF01534 |
Frizzled |
family | Frizzled/Smoothened family membrane region | 13 | 381 |
| PF01545 |
Cation_efflux |
family | Cation efflux family | 78 | 347 |
| PF01553 |
Acyltransferase |
family | Acyltransferase | 59 | 310 |
| PF01562 |
Pep_M12B_propep |
family | Reprolysin family propeptide | 37 | 130 |
| PF01566 |
Nramp |
family | Natural resistance-associated macrophage protein | 17 | 441 |
| PF01569 |
PAP2 |
family | PAP2 superfamily | 88 | 261 |
| PF01582 |
TIR |
family | TIR domain | 46 | 180 |
| PF01585 |
G-patch |
family | G-patch domain | 64 | 68 |
| PF01593 |
Amino_oxidase |
domain | Flavin containing amine oxidoreductase | 92 | 746 |
| PF01602 |
Adaptin_N |
family | Adaptin N terminal region | 33 | 815 |
| PF01603 |
B56 |
family | Protein phosphatase 2A regulatory B subunit (B56 family) | 17 | 417 |
| PF01608 |
I_LWEQ |
family | I/LWEQ domain | 8 | 203 |
| PF01612 |
3_5_exonuc |
domain | 3'-5' exonuclease | 28 | 229 |
| PF01624 |
MutS_I |
domain | MutS domain I | 61 | 150 |
| PF01630 |
Glyco_hydro_56 |
domain | Hyaluronidase | 12 | 349 |
| PF01636 |
APH |
family | Phosphotransferase enzyme family | 278 | 750 |
| PF01731 |
Arylesterase |
family | Arylesterase | 7 | 377 |
| PF01747 |
ATP-sulfurylase |
family | ATP-sulfurylase | 19 | 397 |
| PF01753 |
zf-MYND |
family | MYND finger | 19 | 44 |
| PF01754 |
zf-A20 |
family | A20-like zinc finger | 11 | 26 |
| PF01759 |
NTR |
family | UNC-6/NTR/C345C module | 42 | 202 |
| PF01762 |
Galactosyl_T |
family | Galactosyltransferase | 17 | 235 |
| PF01798 |
Nop |
family | Putative snoRNA binding domain | 16 | 157 |
| PF01799 |
Fer2_2 |
domain | [2Fe-2S] binding domain | 27 | 95 |
| PF01803 |
LIM_bind |
family | LIM-domain binding protein | 5 | 452 |
| PF01805 |
Surp |
family | Surp module | 65 | 55 |
| PF01826 |
TIL |
domain | Trypsin Inhibitor like cysteine rich domain | 53 | 82 |
| PF01833 |
TIG |
domain | IPT/TIG domain | 111 | 178 |
| PF01834 |
XRCC1_N |
domain | XRCC1 N terminal domain | 3 | 155 |
| PF01839 |
FG-GAP |
repeat | FG-GAP repeat | 476 | 67 |
| PF01847 |
VHL |
domain | von Hippel-Lindau disease tumour suppressor protein | 2 | 156 |
| PF01851 |
PC_rep |
repeat | Proteasome/cyclosome repeat | 162 | 43 |
| PF01852 |
START |
domain | START domain | 22 | 262 |
| PF01876 |
RNase_P_p30 |
family | RNase P subunit p30 | 12 | 159 |
| PF01920 |
KE2 |
family | KE2 family protein | 62 | 111 |
| PF01926 |
MMR_HSR1 |
family | GTPase of unknown function | 797 | 369 |
| PF01965 |
DJ-1_PfpI |
family | DJ-1/PfpI family | 44 | 221 |
| PF02008 |
zf-CXXC |
domain | CXXC zinc finger | 14 | 50 |
| PF02012 |
BNR |
repeat | BNR/Asp-box repeat | 188 | 12 |
| PF02014 |
Reeler |
family | Reeler domain | 11 | 155 |
| PF02017 |
CIDE-N |
domain | CIDE-N domain | 7 | 80 |
| PF02019 |
WIF |
family | WIF domain | 6 | 148 |
| PF02023 |
SCAN |
family | SCAN domain | 10 | 96 |
| PF02024 |
Leptin |
domain | Leptin | 7 | 146 |
| PF02037 |
SAP |
family | SAP domain | 56 | 35 |
| PF02038 |
ATP1G1_PLM_MAT8 |
family | ATP1G1/PLM/MAT8 family | 8 | 57 |
| PF02039 |
Adrenomedullin |
family | Adrenomedullin | 2 | 165 |
| PF02063 |
MARCKS |
family | MARCKS family | 4 | 342 |
| PF02104 |
SURF1 |
family | SURF1 family | 3 | 366 |
| PF02106 |
Fanconi_C |
family | Fanconi anaemia group C protein | 3 | 596 |
| PF02115 |
Rho_GDI |
domain | RHO protein GDP dissociation inhibitor | 4 | 213 |
| PF02121 |
IP_trans |
family | Phosphatidylinositol transfer protein | 5 | 265 |
| PF02126 |
PTE |
domain | Phosphotriesterase family | 4 | 355 |
| PF02136 |
NTF2 |
domain | Nuclear transport factor 2 (NTF2) domain | 47 | 158 |
| PF02138 |
Beach |
family | Beige/BEACH domain | 10 | 299 |
| PF02144 |
Rad1 |
family | Repair protein Rad1/Rec1/Rad17 | 3 | 180 |
| PF02148 |
zf-UBP |
domain | Zn-finger in ubiquitin-hydrolases and other protein | 20 | 92 |
| PF02157 |
Man-6-P_recep |
family | Cation-dependent mannose-6-phosphate receptor | 2 | 278 |
| PF02159 |
Oest_recep |
family | Oestrogen receptor | 3 | 185 |
| PF02165 |
WT1 |
family | Wilm's tumour protein | 2 | 322 |
| PF02170 |
PAZ |
family | PAZ domain | 59 | 215 |
| PF02173 |
pKID |
family | pKID domain | 11 | 45 |
| PF02174 |
IRS |
domain | PTB domain (IRS-1 type) | 10 | 116 |
| PF02176 |
zf-TRAF |
family | TRAF-type zinc finger | 14 | 60 |
| PF02180 |
BH4 |
family | Bcl-2 homology region 4 | 7 | 27 |
| PF02181 |
FH2 |
family | Formin Homology 2 Domain | 52 | 641 |
| PF02185 |
HR1 |
family | Hr1 repeat | 15 | 89 |
| PF02188 |
GoLoco |
motif | GoLoco motif | 16 | 24 |
| PF02196 |
RBD |
domain | Raf-like Ras-binding domain | 11 | 78 |
| PF02199 |
SapA |
family | Saposin A-type domain | 6 | 34 |
| PF02201 |
SWIB |
domain | SWIB/MDM2 domain | 42 | 83 |
| PF02207 |
zf-UBR1 |
family | Putative zinc finger in N-recognin | 12 | 86 |
| PF02208 |
Sorb |
family | Sorbin homologous domain | 2 | 50 |
| PF02210 |
Laminin_G_2 |
domain | Laminin G domain | 252 | 273 |
| PF02214 |
K_tetra |
domain | K+ channel tetramerisation domain | 47 | 116 |
| PF02218 |
HS1_rep |
repeat | Repeat in HS1/Cortactin | 18 | 37 |
| PF02221 |
E1_DerP2_DerF2 |
domain | ML domain | 34 | 171 |
| PF02223 |
Thymidylate_kin |
domain | Thymidylate kinase | 26 | 209 |
| PF02238 |
COX7a |
family | Cytochrome c oxidase subunit VIIa | 6 | 76 |
| PF02244 |
Propep_M14 |
domain | Carboxypeptidase activation peptide | 10 | 82 |
| PF02251 |
PA28_alpha |
family | Proteasome activator pa28 alpha subunit | 4 | 64 |
| PF02252 |
PA28_beta |
family | Proteasome activator pa28 beta subunit | 4 | 150 |
| PF02259 |
FAT |
family | FAT domain | 35 | 638 |
| PF02260 |
FATC |
family | FATC domain | 14 | 33 |
| PF02263 |
GBP |
domain | Guanylate-binding protein, N-terminal domain | 14 | 303 |
| PF02267 |
Rib_hydrolayse |
domain | ADP-ribosyl cyclase | 5 | 249 |
| PF02275 |
CBAH |
domain | Linear amide C-N hydrolases, choloylglycine hydrolase family | 8 | 370 |
| PF02285 |
COX8 |
family | Cytochrome oxidase c subunit VIII | 6 | 44 |
| PF02290 |
SRP14 |
family | Signal recognition particle 14kD protein | 4 | 93 |
| PF02296 |
Alpha_adaptin_C |
family | Alpha adaptin AP2, C-terminal domain | 4 | 113 |
| PF02319 |
E2F_TDP |
domain | E2F/DP family winged-helix DNA-binding domain | 36 | 118 |
| PF02345 |
TIL_assoc |
family | TILa domain | 20 | 56 |
| PF02348 |
CTP_transf_3 |
family | Cytidylyltransferase | 20 | 306 |
| PF02351 |
GDNF |
domain | GDNF receptor family | 6 | 439 |
| PF02373 |
JmjC |
family | JmjC domain | 36 | 175 |
| PF02375 |
JmjN |
family | jmjN domain | 11 | 55 |
| PF02376 |
CUT |
domain | CUT domain | 12 | 88 |
| PF02390 |
Methyltransf_4 |
family | Putative methyltransferase | 19 | 294 |
| PF02403 |
Seryl_tRNA_N |
domain | Seryl-tRNA synthetase N-terminal domain | 95 | 121 |
| PF02434 |
Fringe |
family | Fringe-like | 7 | 253 |
| PF02437 |
Ski_Sno |
family | SKI/SNO/DAC family | 5 | 116 |
| PF02453 |
Reticulon |
family | Reticulon | 13 | 208 |
| PF02466 |
Tim17 |
family | Tim17/Tim22/Tim23 family | 34 | 171 |
| PF02469 |
Fasciclin |
family | Fasciclin domain | 132 | 234 |
| PF02485 |
Branch |
family | Core-2/I-Branching enzyme | 25 | 241 |
| PF02518 |
HATPase_c |
domain | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 669 | 341 |
| PF02535 |
Zip |
family | ZIP Zinc transporter | 44 | 723 |
| PF02617 |
ClpS |
family | ATP-dependent Clp protease adaptor protein ClpS | 52 | 96 |
| PF02671 |
PAH |
repeat | Paired amphipathic helix repeat | 78 | 72 |
| PF02728 |
Cu_amine_oxidN3 |
domain | Copper amine oxidase, N3 domain | 18 | 112 |
| PF02735 |
Ku |
domain | Ku70/Ku80 beta-barrel domain | 29 | 332 |
| PF02758 |
PAAD_DAPIN |
family | PAAD/DAPIN/Pyrin domain | 10 | 92 |
| PF02760 |
HIN |
family | HIN-200/IF120x domain | 8 | 171 |
| PF02775 |
TPP_enzyme_C |
domain | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 338 | 250 |
| PF02798 |
GST_N |
domain | Glutathione S-transferase, N-terminal domain | 61 | 105 |
| PF02809 |
UIM |
motif | Ubiquitin interaction motif | 47 | 18 |
| PF02828 |
L27 |
family | L27 domain | 20 | 60 |
| PF02836 |
Glyco_hydro_2_C |
domain | Glycosyl hydrolases family 2, TIM barrel domain | 12 | 364 |
| PF02841 |
GBP_C |
domain | Guanylate-binding protein, C-terminal domain | 6 | 305 |
| PF02845 |
CUE |
family | CUE domain | 24 | 43 |
| PF02865 |
STAT_int |
domain | STAT protein, protein interaction domain | 59 | 134 |
| PF02866 |
Ldh_1_C |
domain | lactate/malate dehydrogenase, alpha/beta C-terminal domain | 30 | 211 |
| PF02872 |
5_nucleotid_C |
domain | 5'-nucleotidase, C-terminal domain | 61 | 254 |
| PF02883 |
Alpha_adaptinC2 |
domain | Adaptin C-terminal domain | 24 | 137 |
| PF02893 |
GRAM |
family | GRAM domain | 37 | 107 |
| PF02897 |
Peptidase_S9_N |
domain | Prolyl oligopeptidase, N-terminal beta-propeller domain | 31 | 521 |
| PF02919 |
Topoisom_I_N |
family | Eukaryotic DNA topoisomerase I, DNA binding fragment | 16 | 239 |
| PF02928 |
zf-C5HC2 |
domain | C5HC2 zinc finger | 13 | 61 |
| PF02932 |
Neur_chan_memb |
family | Neurotransmitter-gated ion-channel transmembrane region | 50 | 528 |
| PF02961 |
BAF |
domain | Barrier to autointegration factor | 3 | 89 |
| PF02984 |
Cyclin_C |
domain | Cyclin, C-terminal domain | 142 | 192 |
| PF02985 |
HEAT |
repeat | HEAT repeat | 748 | 48 |
| PF02996 |
Prefoldin |
family | Prefoldin subunit | 38 | 133 |
| PF03006 |
HlyIII |
family | Haemolysin-III related | 89 | 457 |
| PF03024 |
Folate_rec |
family | Folate receptor family | 9 | 254 |
| PF03034 |
PSS |
family | Phosphatidyl serine synthase | 9 | 310 |
| PF03036 |
Perilipin |
family | Perilipin family | 8 | 430 |
| PF03039 |
IL12 |
domain | Interleukin-12 alpha subunit | 3 | 226 |
| PF03045 |
DAN |
domain | DAN domain | 7 | 133 |
| PF03062 |
MBOAT |
family | MBOAT family | 48 | 444 |
| PF03068 |
PAD |
family | Protein-arginine deiminase (PAD) | 7 | 689 |
| PF03073 |
TspO_MBR |
family | TspO/MBR family | 14 | 159 |
| PF03081 |
Exo70 |
family | Exo70 exocyst complex subunit | 13 | 723 |
| PF03083 |
MtN3_slv |
family | MtN3/saliva family | 30 | 105 |
| PF03096 |
Ndr |
family | Ndr family | 10 | 303 |
| PF03104 |
DNA_pol_B_exo |
family | DNA polymerase family B, exonuclease domain | 39 | 556 |
| PF03129 |
HGTP_anticodon |
domain | Anticodon binding domain | 117 | 141 |
| PF03134 |
TB2_DP1_HVA22 |
family | TB2/DP1, HVA22 family | 17 | 109 |
| PF03144 |
GTP_EFTU_D2 |
domain | Elongation factor Tu domain 2 | 316 | 112 |
| PF03149 |
Flotillin |
pfam entry | Flotillin family | 8 | 198 |
| PF03151 |
DUF250 |
family | Domain of unknown function, DUF250 | 63 | 211 |
| PF03152 |
UFD1 |
family | Ubiquitin fusion degradation protein UFD1 | 8 | 213 |
| PF03159 |
XRN_N |
family | XRN 5'-3' exonuclease N-terminus | 18 | 329 |
| PF03165 |
MH1 |
domain | MH1 domain | 19 | 181 |
| PF03171 |
2OG-FeII_Oxy |
domain | 2OG-Fe(II) oxygenase superfamily | 147 | 183 |
| PF03232 |
COQ7 |
family | Ubiquinone biosynthesis protein COQ7 | 12 | 111 |
| PF03271 |
EB1 |
family | EB1-like C-terminal motif | 13 | 74 |
| PF03298 |
Stanniocalcin |
family | Stanniocalcin family | 4 | 259 |
| PF03311 |
Cornichon |
family | Cornichon protein | 9 | 147 |
| PF03344 |
Daxx |
family | Daxx Family | 2 | 751 |
| PF03348 |
TMS_TDE |
family | TMS membrane protein/tumour differentially expressed protein (TDE) | 6 | 486 |
| PF03351 |
DOMON |
domain | DOMON domain | 27 | 150 |
| PF03366 |
YEATS |
family | YEATS family | 25 | 91 |
| PF03372 |
Exo_endo_phos |
domain | Endonuclease/Exonuclease/phosphatase family | 174 | 1003 |
| PF03399 |
SAC3_GANP |
family | SAC3/GANP family | 11 | 311 |
| PF03403 |
PAF-AH_p_II |
family | Platelet-activating factor acetylhydrolase, plasma/intracellular isoform II | 8 | 448 |
| PF03414 |
Glyco_transf_6 |
family | Glycosyltransferase family 6 | 6 | 341 |
| PF03435 |
Saccharop_dh |
family | Saccharopine dehydrogenase | 55 | 513 |
| PF03439 |
Supt5 |
family | Supt5 repeat | 13 | 54 |
| PF03441 |
FAD_binding_7 |
domain | FAD binding domain of DNA photolyase | 25 | 300 |
| PF03450 |
CO_deh_flav_C |
domain | CO dehydrogenase flavoprotein C-terminal domain | 18 | 118 |
| PF03456 |
uDENN |
domain | uDENN domain | 16 | 136 |
| PF03484 |
B5 |
domain | tRNA synthetase B5 domain | 59 | 100 |
| PF03489 |
SapB_2 |
family | Saposin-like type B, region 2 | 105 | 38 |
| PF03517 |
ICln_channel |
family | Nucleotide-sensitive chloride conductance regulator (ICln) | 5 | 85 |
| PF03523 |
Macscav_rec |
family | Macrophage scavenger receptor | 4 | 49 |
| PF03528 |
Rabaptin |
family | Rabaptin | 3 | 151 |
| PF03546 |
Treacle |
family | Treacher Collins syndrome protein Treacle | 2 | 483 |
| PF03556 |
DUF298 |
family | Domain of unknown function (DUF298) | 10 | 155 |
| PF03593 |
Nuclear_move |
pfam entry | Nuclear movement protein | 9 | 162 |
| PF03615 |
GCM |
family | GCM motif protein | 4 | 106 |
| PF03629 |
DUF303 |
family | Domain of unknown function (DUF303) | 26 | 196 |
| PF03643 |
Vps26 |
family | Vacuolar protein sorting-associated protein 26 | 9 | 412 |
| PF03660 |
PHF5 |
family | PHF5-like protein | 3 | 107 |
| PF03671 |
UPF0185 |
family | Uncharacterised protein family (UPF0185) | 2 | 76 |
| PF03700 |
Sorting_nexin |
family | Sorting nexin, N-terminal domain | 2 | 146 |
| PF03730 |
Ku_C |
family | Ku70/Ku80 C-terminal arm | 21 | 109 |
| PF03731 |
Ku_N |
domain | Ku70/Ku80 N-terminal alpha/beta domain | 17 | 286 |
| PF03810 |
IBN_N |
domain | Importin-beta N-terminal domain | 53 | 104 |
| PF03835 |
Rad4 |
domain | DNA repair protein Rad4 | 6 | 421 |
| PF03896 |
TRAP_alpha |
family | Translocon-associated protein (TRAP), alpha subunit | 3 | 320 |
| PF03920 |
TLE_N |
family | Groucho/TLE N-terminal Q-rich domain | 6 | 180 |
| PF03921 |
ICAM_N |
family | Intercellular adhesion molecule (ICAM), N-terminal domain | 5 | 113 |
| PF03933 |
Peptidase_M10_N |
pfam entry | Matrix metalloprotease, N-terminal domain | 12 | 84 |
| PF03937 |
TPR_div1 |
family | TPR repeat region | 14 | 90 |
| PF03947 |
Ribosomal_L2_C |
domain | Ribosomal Proteins L2, C-terminal domain | 62 | 144 |
| PF03957 |
Jun |
family | Jun-like transcription factor | 8 | 314 |
| PF03981 |
Ubiq_cyt_C_chap |
family | Ubiquinol-cytochrome C chaperone | 6 | 163 |
| PF04000 |
Sas10_Utp3 |
family | Sas10/Utp3 family | 4 | 391 |
| PF04048 |
Sec8_exocyst |
domain | Sec8 exocyst complex component specific domain | 6 | 170 |
| PF04051 |
TRAPP_Bet3 |
family | Transport protein particle (TRAPP) component, Bet3 | 22 | 314 |
| PF04055 |
Radical_SAM |
domain | Radical SAM superfamily | 651 | 439 |
| PF04061 |
ORMDL |
family | ORMDL family | 6 | 145 |
| PF04068 |
RLI |
family | Possible metal-binding domain in RNase L inhibitor, RLI | 22 | 35 |
| PF04099 |
Sybindin |
family | Sybindin-like family | 11 | 234 |
| PF04103 |
CD20 |
family | CD20/IgE Fc receptor beta subunit family | 16 | 177 |
| PF04144 |
SCAMP |
family | SCAMP family | 15 | 186 |
| PF04148 |
DUF396 |
family | Protein of unknown function (DUF396) | 3 | 230 |
| PF04153 |
NOT2_3_5 |
family | NOT2 / NOT3 / NOT5 family | 15 | 210 |
| PF04177 |
TAP42 |
family | TAP42-like family | 9 | 427 |
| PF04178 |
Got1 |
family | Got1-like family | 7 | 101 |
| PF04180 |
LTV |
family | Low temperature viability protein | 5 | 517 |
| PF04193 |
PQ-loop |
repeat | PQ loop repeat | 32 | 67 |
| PF04194 |
PDCD2_C |
domain | Programmed cell death protein 2, C-terminal putative domain | 2 | 178 |
| PF04212 |
MIT |
domain | MIT domain | 32 | 30 |
| PF04258 |
Peptidase_A22B |
family | Signal peptide peptidase | 14 | 451 |
| PF04300 |
FBA |
family | F-box associated region | 6 | 218 |
| PF04321 |
RmlD_sub_bind |
domain | RmlD substrate binding domain | 38 | 357 |
| PF04360 |
Serglycin |
family | Serglycin | 2 | 154 |
| PF04382 |
SAB |
domain | SAB domain | 6 | 72 |
| PF04388 |
Hamartin |
family | Hamartin protein | 6 | 738 |
| PF04408 |
HA2 |
domain | Helicase associated domain (HA2) | 148 | 250 |
| PF04410 |
Gar1 |
family | Gar1 protein RNA binding region | 7 | 104 |
| PF04433 |
SWIRM |
domain | SWIRM domain | 26 | 101 |
| PF04434 |
SWIM |
domain | SWIM zinc finger | 93 | 61 |
| PF04487 |
CITED |
family | CITED | 7 | 251 |
| PF04495 |
GRASP55_65 |
family | GRASP55/65 family | 6 | 382 |
| PF04502 |
DUF572 |
family | Family of unknown function (DUF572) | 12 | 385 |
| PF04511 |
DER1 |
family | Der1-like family | 14 | 300 |
| PF04516 |
CP2 |
family | CP2 transcription factor | 8 | 242 |
| PF04538 |
BEX |
family | Brain expressed X-linked like family | 5 | 117 |
| PF04548 |
AIG1 |
family | AIG1 family | 32 | 259 |
| PF04553 |
Tis11B_C |
family | Tis11B like protein, C terminus | 4 | 120 |
| PF04564 |
U-box |
domain | U-box domain | 17 | 82 |
| PF04568 |
IATP |
family | Mitochondrial ATPase inhibitor, IATP | 11 | 68 |
| PF04571 |
Lipin_N |
family | lipin, N-terminal conserved region | 10 | 116 |
| PF04573 |
SPC22 |
family | Signal peptidase subunit | 8 | 185 |
| PF04636 |
PA26 |
family | PA26 p53-induced protein (sestrin) | 5 | 547 |
| PF04664 |
OGFr_N |
family | Opioid growth factor receptor (OGFr) conserved region | 2 | 215 |
| PF04668 |
Tsg |
family | Twisted gastrulation (Tsg) protein conserved region | 5 | 144 |
| PF04670 |
Gtr1_RagA |
family | Gtr1/RagA G protein conserved region | 11 | 241 |
| PF04691 |
ApoC-I |
family | Apolipoprotein C-I (ApoC-1) | 4 | 61 |
| PF04706 |
Dickkopf_N |
family | Dickkopf N-terminal cysteine-rich region | 8 | 60 |
| PF04707 |
MSF1 |
family | MSF1-like conserved region | 16 | 177 |
| PF04710 |
Pellino |
family | Pellino | 4 | 426 |
| PF04716 |
ETC_C1_NDUFA5 |
family | ETC complex I subunit conserved region | 5 | 58 |
| PF04719 |
TAFII28 |
family | hTAFII28-like protein conserved region | 10 | 100 |
| PF04722 |
Ssu72 |
family | Ssu72-like protein | 6 | 203 |
| PF04727 |
ELMO_CED12 |
family | ELMO/CED-12 family | 11 | 208 |
| PF04775 |
Bile_Hydr_Trans |
family | Acyl-CoA thioester hydrolase / Bile acid-CoA amino acid N-acetyltransferase | 9 | 157 |
| PF04777 |
Evr1_Alr |
family | Erv1 / Alr family | 11 | 99 |
| PF04790 |
Sarcoglycan_1 |
family | Sarcoglycan complex subunit protein | 6 | 290 |
| PF04810 |
zf-Sec23_Sec24 |
domain | Sec23/Sec24 zinc finger | 25 | 42 |
| PF04811 |
Sec23_trunk |
domain | Sec23/Sec24 trunk domain | 23 | 295 |
| PF04819 |
DUF716 |
family | Family of unknown function (DUF716) | 11 | 166 |
| PF04821 |
TIMELESS |
family | Timeless protein | 14 | 389 |
| PF04824 |
Rad21_Rec8 |
family | Conserved region of Rad21 / Rec8 like protein | 16 | 59 |
| PF04826 |
DUF634 |
family | Protein of unknown function (DUF634) | 7 | 264 |
| PF04836 |
IFRD_C |
family | Interferon-related protein conserved region | 6 | 62 |
| PF04840 |
Vps16_C |
family | Vps16, C-terminal region | 5 | 336 |
| PF04845 |
PurA |
family | PurA ssDNA and RNA-binding protein | 7 | 317 |
| PF04857 |
CAF1 |
family | CAF1 family ribonuclease | 30 | 840 |
| PF04871 |
Uso1_p115_C |
family | Uso1 / p115 like vesicle tethering protein, C terminal region | 6 | 153 |
| PF04874 |
Mak16 |
family | Mak16 protein | 10 | 304 |
| PF04880 |
NUDE_C |
family | NUDE protein, C-terminal conserved region | 5 | 218 |
| PF04889 |
Cwf_Cwc_15 |
family | Cwf15/Cwc15 cell cycle control protein | 5 | 296 |
| PF04893 |
Yip1 |
domain | Yip1 domain | 21 | 210 |
| PF04904 |
NCD1 |
family | NAB conserved region 1 (NCD1) | 2 | 82 |
| PF04905 |
NCD2 |
family | NAB conserved region 2 (NCD2) | 4 | 177 |
| PF04916 |
Laminin_A |
family | Laminin A | 7 | 742 |
| PF04928 |
PAP_central |
domain | Poly(A) polymerase central domain | 20 | 383 |
| PF04935 |
SURF6 |
family | Surfeit locus protein 6 | 10 | 230 |
| PF04968 |
CHORD |
family | CHORD | 14 | 66 |
| PF04981 |
NMD3 |
family | NMD3 family | 17 | 285 |
| PF04983 |
RNA_pol_Rpb1_3 |
domain | RNA polymerase Rpb1, domain 3 | 114 | 365 |
| PF04988 |
AKAP95 |
family | A-kinase anchoring protein 95 (AKAP95) | 3 | 508 |
| PF04992 |
RNA_pol_Rpb1_6 |
domain | RNA polymerase Rpb1, domain 6 | 74 | 205 |
| PF05002 |
SGS |
domain | SGS domain | 11 | 94 |
| PF05005 |
Ocnus |
family | Janus/Ocnus family (Ocnus) | 7 | 115 |
| PF05018 |
DUF667 |
family | Protein of unknown function (DUF667) | 7 | 196 |
| PF05030 |
SSXT |
family | SSXT protein (N-terminal region) | 4 | 78 |
| PF05033 |
Pre-SET |
motif | Pre-SET motif | 24 | 190 |
| PF05038 |
Cytochrom_B558a |
family | Cytochrome Cytochrome b558 alpha-subunit | 4 | 194 |
| PF05047 |
L51_S25_CI-B8 |
domain | Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain | 20 | 105 |
| PF05049 |
IIGP |
family | Interferon-inducible GTPase (IIGP) | 6 | 384 |
| PF05104 |
Rib_recp_KP_reg |
family | Ribosome receptor lysine/proline rich region | 2 | 144 |
| PF05110 |
AF-4 |
family | AF-4 proto-oncoprotein | 8 | 1430 |
| PF05147 |
LANC_like |
family | Lanthionine synthetase C-like protein | 7 | 412 |
| PF05154 |
TM2 |
domain | TM2 domain | 27 | 55 |
| PF05160 |
DSS1_SEM1 |
family | DSS1/SEM1 family | 6 | 94 |
| PF05182 |
Fip1 |
motif | Fip1 motif | 8 | 64 |
| PF05184 |
SapB_1 |
domain | Saposin-like type B, region 1 | 72 | 43 |
| PF05188 |
MutS_II |
domain | MutS domain II | 47 | 214 |
| PF05191 |
ADK_lid |
domain | Adenylate kinase, active site lid | 36 | 38 |
| PF05193 |
Peptidase_M16_C |
domain | Peptidase M16 inactive domain | 194 | 409 |
| PF05197 |
DUF714 |
family | Domain of unknown function | 6 | 200 |
| PF05221 |
AdoHcyase |
domain | S-adenosyl-L-homocysteine hydrolase | 9 | 502 |
| PF05240 |
APOBEC_C |
domain | APOBEC-like C-terminal domain | 16 | 70 |
| PF05241 |
EBP |
family | Emopamil binding protein | 8 | 255 |
| PF05276 |
SH3BP5 |
family | SH3 domain-binding protein 5 (SH3BP5) | 4 | 243 |
| PF05300 |
DUF737 |
family | Protein of unknown function (DUF737) | 2 | 214 |
| PF05308 |
DUF729 |
family | Protein of unknown function (DUF729) | 6 | 271 |
| PF05334 |
DUF719 |
family | Protein of unknown function (DUF719) | 3 | 306 |
| PF05337 |
CSF-1 |
family | Macrophage colony stimulating factor-1 (CSF-1) | 7 | 331 |
| PF05348 |
UMP1 |
family | Proteasome maturation factor UMP1 | 7 | 134 |
| PF05351 |
GMP_PDE_delta |
family | GMP-PDE, delta subunit | 6 | 162 |
| PF05383 |
La |
domain | La domain | 36 | 72 |
| PF05392 |
COX7B |
family | Cytochrome C oxidase chain VIIB | 4 | 81 |
| PF05406 |
WGR |
domain | WGR domain | 31 | 92 |
| PF05434 |
TMEM9 |
family | TMEM9 | 5 | 176 |
| PF05456 |
eIF_4EBP |
family | Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) | 6 | 125 |
| PF05458 |
Siva |
family | Cd27 binding protein (Siva) | 2 | 175 |
| PF05460 |
ORC6 |
family | Origin recognition complex subunit 6 (ORC6) | 9 | 496 |
| PF05477 |
SURF2 |
family | Surfeit locus protein 2 (SURF2) | 4 | 264 |
| PF05478 |
Prominin |
family | Prominin | 7 | 919 |
| PF05499 |
DMAP1 |
family | DNA methyltransferase 1-associated protein 1 (DMAP1) | 3 | 181 |
| PF05507 |
MAGP |
family | Microfibril-associated glycoprotein (MAGP) | 4 | 152 |
| PF05510 |
Sarcoglycan_2 |
family | Sarcoglycan alpha/epsilon | 4 | 462 |
| PF05511 |
ATP-synt_F6 |
family | Mitochondrial ATP synthase coupling factor 6 | 4 | 97 |
| PF05586 |
Ant_C |
family | Anthrax receptor C-terminus region | 2 | 95 |
| PF05593 |
RHS_repeat |
repeat | RHS Repeat | 230 | 76 |
| PF05615 |
DUF783 |
family | Protein of unknown function (DUF783) | 4 | 210 |
| PF05620 |
DUF788 |
family | Protein of unknown function (DUF788) | 8 | 195 |
| PF05644 |
DUF800 |
family | Protein of unknown function (DUF800) | 2 | 273 |
| PF05739 |
SNARE |
family | SNARE domain | 111 | 67 |
| PF05742 |
DUF833 |
family | Protein of unknown function (DUF833) | 13 | 337 |
| PF05746 |
tRNA-synt_1d_C |
domain | DALR anticodon binding domain | 107 | 185 |
| PF05760 |
IER |
family | Immediate early response protein (IER) | 6 | 428 |
| PF05773 |
RWD |
domain | RWD domain | 59 | 222 |
| PF05805 |
L6_membrane |
family | L6 membrane protein | 9 | 233 |
| PF05808 |
Podoplanin |
family | Podoplanin | 4 | 179 |
| PF05811 |
DUF842 |
family | Eukaryotic protein of unknown function (DUF842) | 6 | 139 |
| PF05863 |
DUF850 |
family | Eukaryotic protein of unknown function (DUF850) | 6 | 254 |
| PF05915 |
DUF872 |
family | Eukaryotic protein of unknown function (DUF872) | 4 | 148 |
| PF05924 |
SAMP |
motif | SAMP Motif | 6 | 22 |
| PF05956 |
APC_basic |
motif | APC basic domain | 3 | 391 |
| PF05964 |
FYRN |
family | F/Y-rich N-terminus | 21 | 59 |
| PF05965 |
FYRC |
family | F/Y rich C-terminus | 18 | 100 |
| PF05986 |
ADAM_spacer1 |
family | ADAM-TS Spacer 1 | 25 | 135 |
| PF05994 |
FragX_IP |
family | Cytoplasmic Fragile-X interacting family | 3 | 1293 |
| PF05997 |
Nop52 |
family | Nucleolar protein,Nop52 | 10 | 234 |
| PF06008 |
Laminin_I |
family | Laminin Domain I | 11 | 279 |
| PF06009 |
Laminin_II |
family | Laminin Domain II | 10 | 144 |
| PF06026 |
Rib_5-P_isom_A |
family | Ribose 5-phosphate isomerase A (phosphoriboisomerase A) | 59 | 204 |
| PF06031 |
SERTA |
motif | SERTA motif | 7 | 38 |
| PF06046 |
Sec6 |
family | Exocyst complex component Sec6 | 11 | 854 |
| PF06058 |
DCP1 |
family | Dcp1-like decapping family | 9 | 131 |
| PF06077 |
LR8 |
family | LR8 protein | 4 | 230 |
| PF06080 |
DUF938 |
family | Protein of unknown function (DUF938) | 6 | 218 |
| PF06105 |
Aph-1 |
family | Aph-1 protein | 6 | 285 |
| PF06110 |
DUF953 |
family | Eukaryotic protein of unknown function (DUF953) | 6 | 136 |
| PF06113 |
BRE |
family | Brain and reproductive organ-expressed protein (BRE) | 2 | 333 |
| PF06119 |
NIDO |
family | Nidogen-like | 18 | 111 |
| PF06137 |
TFA |
family | Transcription elongation factor A, SII-related family | 9 | 188 |
| PF06140 |
Ifi-6-16 |
family | Interferon-induced 6-16 family | 9 | 85 |
| PF06201 |
DUF1000 |
family | Domain of Unknown Function (DUF1000) | 13 | 185 |
| PF06220 |
zf-U1 |
domain | U1 zinc finger | 12 | 38 |
| PF06272 |
eIF-3_p25 |
pfam entry | Eukaryotic translation initiation factor 3 subunit 11 (eIF-3 p25) | 6 | 250 |
| PF06294 |
DUF1042 |
family | Domain of Unknown Function (DUF1042) | 7 | 167 |
| PF06309 |
Torsin |
family | Torsin | 8 | 297 |
| PF06345 |
Drf_DAD |
motif | DRF Autoregulatory Domain | 3 | 15 |
| PF06346 |
Drf_FH1 |
family | Formin Homology Region 1 | 4 | 181 |
| PF06350 |
HSL_N |
family | Hormone-sensitive lipase (HSL) N-terminus | 2 | 315 |
| PF06365 |
CD34_antigen |
family | CD34 antigen protein | 4 | 396 |
| PF06367 |
Drf_FH3 |
domain | Diaphanous FH3 Domain | 24 | 263 |
| PF06371 |
Drf_GBD |
domain | Diaphanous GTPase-binding Domain | 17 | 394 |
| PF06388 |
DUF1075 |
family | Protein of unknown function (DUF1075) | 3 | 159 |
| PF06413 |
Neugrin |
family | Neugrin | 2 | 222 |
| PF06448 |
DUF1081 |
family | Domain of Unknown Function (DUF1081) | 11 | 164 |
| PF06456 |
Arfaptin |
domain | Arfaptin-like domain | 11 | 245 |
| PF06466 |
PCAF_N |
domain | PCAF (P300/CBP-associated factor) N-terminal domain | 4 | 277 |
| PF06467 |
zf-MYM |
domain | MYM-type Zinc finger | 42 | 45 |
| PF06470 |
SMC_hinge |
domain | SMC proteins Flexible Hinge Domain | 98 | 157 |
| PF06472 |
ABC_membrane_2 |
family | ABC transporter transmembrane region 2 | 26 | 333 |
| PF06480 |
FtsH_ext |
family | FtsH Extracellular | 109 | 274 |
| PF06482 |
Endostatin |
domain | Collagenase NC10 and Endostatin | 8 | 370 |
| PF06484 |
Ten_N |
family | Teneurin Intracellular Region | 5 | 414 |
| PF06529 |
Vert_IL3-reg_TF |
family | Vertebrate interleukin-3 regulated transcription factor | 2 | 333 |
| PF06581 |
DUF1135 |
family | Protein of unknown function (DUF1135) | 3 | 267 |
| PF06584 |
DIRP |
family | DIRP | 6 | 110 |
| PF06602 |
Myotub-related |
family | Myotubularin-related | 52 | 180 |
| PF06608 |
DUF1143 |
family | Protein of unknown function (DUF1143) | 2 | 149 |
| PF06621 |
SIM_C |
family | Single-minded protein C-terminus | 4 | 337 |
| PF06665 |
DUF1172 |
pfam entry | Protein of unknown function (DUF1172) | 4 | 133 |
| PF06682 |
DUF1183 |
family | Protein of unknown function (DUF1183) | 2 | 340 |
| PF06699 |
PIG-F |
family | Phospho-ethanolamine N-methyltransferase | 4 | 216 |
| PF06701 |
MIB_HERC2 |
domain | Mib_herc2 | 10 | 69 |
| PF06702 |
DUF1193 |
family | Protein of unknown function (DUF1193) | 6 | 243 |
| PF06741 |
Ataxin-2_N |
domain | Ataxin-2 N-terminal region | 10 | 142 |
| PF06743 |
FAST_Leu-rich |
family | FAST kinase leucine-rich | 11 | 188 |
| PF06747 |
CHCH |
domain | CHCH domain | 47 | 46 |
| PF06773 |
Bim_N |
family | Bim protein N-terminus | 3 | 40 |
| PF06777 |
DUF1227 |
family | Protein of unknown function (DUF1227) | 10 | 158 |
| PF06809 |
NPDC1 |
family | Neural proliferation differentiation control-1 protein (NPDC1) | 2 | 332 |
| PF06816 |
NOD |
family | NOTCH protein | 18 | 60 |
| PF06827 |
zf-FPG_IleRS |
domain | Zinc finger found in FPG and IleRS | 77 | 32 |
| PF06839 |
zf-GRF |
domain | GRF zinc finger | 17 | 54 |
| PF06858 |
NOG1 |
family | Nucleolar GTP-binding protein 1 (NOG1) | 25 | 61 |
| PF06859 |
Bin3 |
family | Bicoid-interacting protein 3 (Bin3) | 5 | 112 |
| PF06870 |
RNA_pol_I_A49 |
family | A49-like RNA polymerase I associated factor | 7 | 465 |
| PF06881 |
Elongin_A |
family | RNA polymerase II transcription factor SIII (Elongin) subunit A | 5 | 128 |
| PF06883 |
RNA_pol_Rpa2_4 |
domain | RNA polymerase I, Rpa2 specific domain | 10 | 80 |
| PF06907 |
Latexin |
family | Latexin | 4 | 229 |
| PF06920 |
Ded_cyto |
family | Dedicator of cytokinesis | 10 | 195 |
| PF06954 |
Resistin |
family | Resistin | 8 | 111 |
| PF06979 |
DUF1301 |
family | Protein of unknown function (DUF1301) | 4 | 163 |
| PF07002 |
Copine |
family | Copine | 24 | 176 |
| PF07010 |
Endomucin |
family | Endomucin | 3 | 267 |
| PF07051 |
OCIA |
family | Ovarian carcinoma immunoreactive antigen (OCIA) | 2 | 128 |
| PF07061 |
DUF1337 |
family | Protein of unknown function (DUF1337) | 6 | 96 |
| PF07084 |
Spot_14 |
family | Thyroid hormone-inducible hepatic protein Spot 14 | 4 | 186 |
| PF07086 |
DUF1352 |
family | Protein of unknown function (DUF1352) | 5 | 204 |
| PF07114 |
DUF1370 |
family | Protein of unknown function (DUF1370) | 4 | 187 |
| PF07139 |
DUF1387 |
family | Protein of unknown function (DUF1387) | 2 | 313 |
| PF07140 |
IFNGR1 |
family | Interferon gamma receptor alpha chain (IFNGR1) | 3 | 492 |
| PF07142 |
DUF1388 |
repeat | Repeat of unknown function (DUF1388) | 15 | 29 |
| PF07145 |
PAM2 |
motif | Ataxin-2 C-terminal region | 40 | 18 |
| PF07156 |
Prenylcys_lyase |
family | Prenylcysteine lyase | 5 | 386 |
| PF07200 |
Mod_r |
domain | Modifier of rudimentary (Mod(r)) protein | 10 | 151 |
| PF07258 |
HCaRG |
family | HCaRG protein | 16 | 207 |
| PF07263 |
DMP1 |
family | Dentin matrix protein 1 (DMP1) | 3 | 520 |
| PF07292 |
NID |
domain | Nmi/IFP 35 domain (NID) | 4 | 92 |
| PF07303 |
Occludin_ELL |
domain | Occludin and RNA polymerase II elongation factor ELL | 10 | 115 |
| PF07304 |
SRA1 |
family | Steroid receptor RNA activator (SRA1) | 2 | 164 |
| PF07324 |
DGCR6 |
family | DiGeorge syndrome critical region 6 (DGCR6) protein | 3 | 207 |
| PF07326 |
DUF1466 |
family | Protein of unknown function (DUF1466) | 2 | 239 |
| PF07334 |
IFP_35_N |
family | Interferon-induced 35 kDa protein (IFP 35) N-terminus | 4 | 88 |
| PF07406 |
NICE-3 |
family | NICE-3 protein | 2 | 189 |
| PF07412 |
Geminin |
family | Geminin | 4 | 221 |
| PF07469 |
DUF1518 |
domain | Domain of unknown function (DUF1518) | 17 | 58 |
| PF07474 |
G2F |
domain | G2F domain | 7 | 212 |
| PF07493 |
C1D |
pfam entry | Exosome-associated protein | 3 | 188 |
| PF07500 |
TFIIS_M |
domain | Transcription factor S-II (TFIIS), central domain | 28 | 134 |
| PF07521 |
RMMBL |
motif | RNA-metabolising metallo-beta-lactamase | 95 | 47 |
| PF07525 |
SOCS_box |
domain | SOCS box | 65 | 46 |
| PF07527 |
Hairy_orange |
domain | Hairy Orange | 45 | 58 |
| PF07528 |
DZF |
domain | DZF | 6 | 262 |
| PF07533 |
TCH |
domain | Associated with TFs and helicases | 15 | 50 |
| PF07546 |
EMI |
domain | EMI domain | 25 | 99 |
| PF07562 |
NCD3G |
family | Nine Cysteines Domain of family 3 GPCR | 38 | 38 |
| PF07572 |
BCNT |
family | Bucentaur or craniofacial development | 7 | 87 |
| PF07574 |
SMC_Nse1 |
family | Nse1 non-SMC component of SMC5-6 complex | 11 | 259 |
| PF07575 |
Nucleopor_Nup85 |
family | Nup85 Nucleoporin | 16 | 743 |
| PF07647 |
SAM_2 |
domain | SAM domain (Sterile alpha motif) | 49 | 79 |
| PF07648 |
Kazal_2 |
domain | Kazal-type serine protease inhibitor domain | 71 | 95 |
| PF07653 |
SH3_2 |
domain | Variant SH3 domain | 39 | 153 |
| PF07654 |
C1-set |
domain | Immunoglobulin C1-set domain | 129 | 105 |
| PF07679 |
I-set |
domain | Immunoglobulin I-set domain | 58 | 114 |
| PF07684 |
NODP |
family | NOTCH protein | 20 | 67 |
| PF07686 |
V-set |
domain | Immunoglobulin V-set domain | 121 | 200 |
| PF07690 |
MFS_1 |
family | Major Facilitator Superfamily | 208 | 729 |
| PF07699 |
GCC2_GCC3 |
family | GCC2 and GCC3 | 51 | 76 |
| PF07701 |
HNOBA |
domain | Heme NO binding associated | 20 | 274 |
| PF07707 |
BACK |
domain | BTB And C-terminal Kelch | 88 | 108 |
| PF07714 |
Pkinase_Tyr |
domain | Protein tyrosine kinase | 155 | 534 |
| PF07717 |
DUF1605 |
family | Domain of unknown function (DUF1605) | 133 | 397 |
| PF07719 |
TPR_2 |
repeat | Tetratricopeptide repeat | 388 | 35 |
| PF07724 |
AAA_2 |
domain | ATPase family associated with various cellular activities (AAA) | 146 | 257 |
| PF07738 |
Sad1_UNC |
family | Sad1 / UNC-like C-terminal | 28 | 159 |
| PF07744 |
SPOC |
domain | SPOC domain | 20 | 146 |
| PF07748 |
Glyco_hydro_38C |
domain | Glycosyl hydrolases family 38 C-terminal domain | 47 | 925 |
| PF07780 |
Spb1_C |
domain | Spb1 C-terminal domain | 13 | 230 |
| PF07798 |
DUF1640 |
family | Protein of unknown function (DUF1640) | 9 | 237 |
| PF07809 |
RTP801_C |
family | RTP801 C-terminal region | 6 | 124 |
| PF07842 |
GCFC |
family | GC-rich sequence DNA-binding factor-like protein | 7 | 556 |
| PF07894 |
DUF1669 |
family | Protein of unknown function (DUF1669) | 9 | 310 |
| PF07912 |
ERp29_N |
domain | ERp29, N-terminal domain | 3 | 128 |
| PF07915 |
PRKCSH |
family | Glucosidase II beta subunit-like protein | 26 | 92 |
| PF07933 |
DUF1681 |
family | Protein of unknown function (DUF1681) | 13 | 235 |
| PF07962 |
Swi3 |
family | Replication Fork Protection Component Swi3 | 13 | 87 |
| PF07965 |
Integrin_B_tail |
domain | Integrin beta tail domain | 35 | 102 |
| PF07967 |
zf-C3HC |
domain | C3HC zinc finger-like | 5 | 122 |
| PF07973 |
tRNA_SAD |
domain | Threonyl and Alanyl tRNA synthetase second additional domain | 222 | 79 |
| PF07974 |
EGF_2 |
domain | EGF-like domain | 55 | 51 |
| PF07978 |
NIPSNAP |
domain | NIPSNAP | 29 | 107 |
| PF08007 |
Cupin_4 |
family | Cupin superfamily protein | 29 | 483 |
| PF08033 |
Sec23_BS |
domain | Sec23/Sec24 beta-sandwich domain | 58 | 113 |
| PF08038 |
Tom7 |
family | TOM7 family | 10 | 50 |
| PF08043 |
Actin_bind_SAA |
repeat | Actin Binding Sixteen Amino Acid Repeat | 60 | 16 |
| PF08080 |
zf-RNPHF |
domain | RNPHF zinc finger | 3 | 36 |
| PF08122 |
NDUF_B12 |
family | NADH-ubiquinone oxidoreductase B12 subunit family | 7 | 63 |
| PF08127 |
Propeptide_C1 |
motif | Propeptide_C1 | 57 | 46 |
| PF08142 |
AARP2CN |
domain | AARP2CN (NUC121) domain | 29 | 93 |
| PF08144 |
CPL |
domain | CPL (NUC119) domain | 4 | 160 |
| PF08145 |
BOP1NT |
domain | BOP1NT (NUC169) domain | 13 | 269 |
| PF08148 |
DSHCT |
domain | DSHCT (NUC185) domain | 37 | 204 |
| PF08152 |
GUCT |
domain | GUCT (NUC152) domain | 10 | 105 |
| PF08157 |
NUC129 |
domain | NUC129 domain | 2 | 63 |
| PF08190 |
Nop17p |
family | Nop17p (pre-rRNA processing) | 16 | 344 |