The entire PANDITplus database is available for download. In publication of research that makes use of the data, a citation should be given of:
If you use the additional information about intrinsically disordered regions please cite:
Create your own PANDITplus
You can create your own instance of a PANDITplus database by building one de novo.
To build the PANDITplus database from scratch, you will need a MySQL server and the PANDITplus database SQL source.
Installation packages and documentation on the MySQL database itself can be found on the MySQL website. The PANDITplus SQL source can be found here:
Local installation from database dumps
PANDITplus database can be downloaded as a MySQL database dump and reconstituted on any system where MySQL is running.
The data is also available as SQL statements for use with other database management systems. The ER diagram of
PANDITplus is shown here.
Bulk download of alignments and trees
Amino acid (AA) and nucleotide (DNA) sequence alignments for all families from
PANDIT (each family AA and DNA alignment/tree
represented in separate file) can be downloaded from here:
Complete AA and DNA sequence alignments together with phylogenies and associated information can be obtained also from PANDIT